Ll_transcript_479450

• Id Trinity: TRINITY_DN52767_c1_g1_i15
• Name Transcript: Ll_transcript_479450
• Sequence: TAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATAT ACCAAAGAAAAGATCAATTGGAGTTACATAGAGTTTATTGACAACCAAGATGTTTTGGATCTCATTGAGAAGAAACCTGGAGGAATAATTTCACTTCTTG ATGAAGCTTGGTATGCAGCTAATAGCGAAATCATTCTGAATTTGACATTGCTTTCAATTTAGTTTGAAGTCTATGCTTATATATTTTGTGAATTAACATT TTTTAATGTGGTTTCTTTCTTAGACTTCTTCGGGGATTGCCTGTGAATTATAGCTTGATTGAACTCATAATAGTATGGTTTTGTGACACAGTATGTTTCC TAAGTCTACACATGAAACATTTTCTCAGAAGTTGTACCAGACATTCAAAAACAACAAACGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACAATA TCTCATTATGCAGGGGAGGTAGATATATTTGGTTCTTTTTGTCGTGTGTTCCCTTTTATGACTTTATTTTTTATTTAGATTGTCCATGGCCATTATGCTC TACCTTTCTACTATCACTTCTCTGTGCAGGTGACATATTTGGCTAATTTGTTTCTCGACAAAAACAAGGACTATGTAGTCGCAGAACATCAAGATCTACT GACAGCCTCAAAATGCTCATTTGCAGCAAGTCTATTCCCTCCTTCTCCAGAAGAGTCTTCAAAATCATCCAAGTTCTCTTCAATTGGATCTCGCTTTAAG CTACAACTTCAGTCTTTGATGGAGACCCTAAGTTCAACCGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTTAAGCCTGCTATTCTTGAAA ATGTCAATATTATGCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGCTATCCTACCAGACGGACTTTTTATGAATTTCT TAACCGATTTGGTGTCCTTGCCCCTCAAGTTCTGGATGGAAAGTAGAGCTCATCTCTTTTTTATGCTGTTTTATCATTGTATTTGAACATGACTTTTCTT TTTTACATGCAAAACTTGTTTGTCTTGTATGTCTTGATTTCTAGGGGGTTGCTGTATGATTTAATGCCCTCTCTTTTTTGTCTTGATTTCTACTTGTTCC TTTTCAGCTCTGATGACAAGGTTGCATGCCAAATGATTCTAGATAAAGTGGGTATGAAAGGCTATCAGATTGGGAGGACAAAGGTTTTCCTAAGAGCTGG CCAGATGGCTGAGCTGGATGCAAGAAGAGCAAAGGTTCTTGGAAATGCAGCTAGAGTCATCCAGGGGCAAATACGTACCCATATTGCACGCAAAGTGTTC ATTGAATTGCGTCAAGCTGCAATTCGTGTGCAGTCTAATTTGCGAGGATTGCTATCCCGAAAGCTCTATGAGCACCTGCGACGTGAAGCAGCAGCTGTAA AGATAGAAAAGAACTTCAAACGATACATCGCCTGGAAGTCTTACGTAACAGAACGGTCATCTGCAATTATATTACAGACAGGTTTAAGGGTTATGAAGGC TCGTGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTCATATTCAGGCTCGTTTGCGTCGACTACTTGCATATTCATATTTTAAAAGATTGCAA AAGGCTGCAATTTTTACTCAGTGTGGCTGGAGGAGAAGGGTTGCTAAGAGGGAACTTAGAAATCTTAAGATGGCTGCAAGAGAAACGGGGGCCCTTAAAG AAGCAAAAGACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGATAAGGCACAAGA AATTTCAAAGTTACGGGATACTTTGCATGCAATGCAAAAACAAGTAGAAGAAGCAAATGGCAGGGTTATCAAAGAGCGAGAGGCTGCACAAAAGGCCATT GAAGAAGCACCTCCAGTCATTAAGGAAACTCCTGTAATAATTCAAGATACTGAGAAGATTAATTCTTTAACCGATGAAGTCAAAAGTTTGAAGGAATTGT TGCTATTGGAAAGAGAGGCTAAAGAAGAGGCCAGGAAGGCTGAGGCTGAGGCTGAAACCAGGAATAAGGATCTGCTTAAAAAAGTTGAGGATTCTGATCG CAAAATGGAACAACTCCAGGAACTGATTCAGAGATTGGAGGACAAAATTTCCAATTCGGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCACTGGCTGTA TCACCAACTGGAAAAGCTCTGCCTG
• Tissue: pods
• Gene name: LI_gene_195417;
• Additional information: details;

Expression of Ll_transcript_479450

FPKM

• PAB: 0.3
• PNAB: 1.2
• PS1: 1.3
• PS2: 0.4
• PS3: 1.4
• PW1: 0.7
• PW2: 1.1
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479450

• Blastp: Myosin-17 from Arabidopsis with 67.84% of identity
• Blastx: Myosin-17 from Arabidopsis with 61.59% of identity
• Eggnog: myosin heavy chain(COG5022)
• Kegg: Link to kegg annotations (AT5G20490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443084.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;