| Id Trinity | TRINITY_DN52767_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_479452 |
| Sequence | TAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATAT ACCAAAGAAAAGATCAATTGGAGTTACATAGAGTTTATTGACAACCAAGATGTTTTGGATCTCATTGAGAAGAAACCTGGAGGAATAATTTCACTTCTTG ATGAAGCTTGGTATGCAGCTAATAGCGAAATCATTCTGAATTTGACATTGCTTTCAATTTAGTTTGAAGTCTATGCTTATATATTTTGTGAATTAACATT TTTTAATGTGGTTTCTTTCTTAGACTTCTTCGGGGATTGCCTGTGAATTATAGCTTGATTGAACTCATAATAGTATGGTTTTGTGACACAGTATGTTTCC TAAGTCTACACATGAAACATTTTCTCAGAAGTTGTACCAGACATTCAAAAACAACAAACGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACAATA TCTCATTATGCAGGGGAGGTGACATATTTGGCTGATCTGTTTCTTGACAAAAACAAGGATTATGTTGTCGCAGAACATCAAGATCTACTGACAGCCTCAA AATGCTCATTTGCAGCAAGTCTATTCCCTCCTTCTCCAGAAGAGTCTTCAAAATCATCCAAGTTCTCTTCAATTGGATCTCGCTTTAAGCTACAACTTCA GTCTTTGATGGAGACCCTAAGTTCAACCGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTTAAGCCTGCTATTCTTGAAAATGTCAATATT ATGCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGCTATCCTACCAGACGGACTTTTTATGAATTTCTTAACCGATTTG GTGTCCTTGCCCCTCAAGTTCTGGATGGAAAGTAGAGCTCATCTCTTTTTTATGCTGTTTTATCATTGTATTTGAACATGACTTTTCTTTTTTACATGCA AAACTTGTTTGTCTTGTATGTCTTGATTTCTAGGGGGTTGCTGTATGATTTAATGCCCTCTCTTTTTTGTCTTGATTTCTACTTGTTCCTTTTCAGCTCT GATGACAAGGTTGCATGCCAAATGATTCTAGATAAAGTGGGTATGAAAGGCTATCAGATTGGGAGGACAAAGGTTTTCCTAAGAGCTGGCCAGATGGCTG AGCTGGATGCAAGAAGAGCAAAGGTTCTTGGAAATGCAGCTAGAGTCATCCAGGGGCAAATACGTACCCATATTGCACGCAAAGTGTTCATTGAATTGCG TCAAGCTGCAATTCGTGTGCAGTCTAATTTGCGAGGATTGCTATCCCGAAAGCTCTATGAGCACCTGCGACGTGAAGCAGCAGCTGTAAAGATAGAAAAG AACTTCAAACGATACATCGCCTGGAAGTCTTACGTAACAGAACGGTCATCTGCAATTATATTACAGACAGGTTTAAGGGTTATGAAGGCTCGTGATGAAT TTAGATTTAGAAAGCAAACAAAGGCTGCAATTTGTATCCAGGCTCATTTGCGTCGGCAATTTGCATATTCATATTATAAAAGATTGCAAAAAGCTGCAAT TGTTACTCAGTGCGGCTGGAGGAGAAGGGTTGCCAAGAGGGAACTTAGAAACCTCAAGATGGCTGCAAGAGAAACAGGTGCCCTTAAAGAAGCCAAAGAC AAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAGTACATCATCATATTTTTAATAAATATATCAAATTTTGAG TTCAATTTCTGATGTAAATATTGCAGTTTTTTATACTGTACCTTTTAAAAAAACTAATTACAGACTGATTTGGAAGAGGACAAGGCACAAGAAATTGCCA AGTTACATGATACTTTGCATACAATGCAAAAACAAGTAGAAGAAGCAAATGCCAGGGTCGTCAAAGAGCGTGAGGAGGCACAAAAAGCCATTGAAGAAGC ACCTCCAGTTATTAAGGAGACTCCTGTTATAATTCAAGATACTGAAAAGATTAATTCCTTGATGGCTGATATCAATAGTTTGAATGAATCACTGATGATG GAAAGAAAGGATAAAGAAGAAGCCAGAAAAGCTCATGCTGAGGCTGAGGCTAGAAATGAAGAGCTGGTTAAAAAAGTTGACAGTTATGAGCACAAAGTGG ATCAACTCCAAGAATTGGTTCAGAGGCTGGAGGATAAAATTTCAAATATGGAATCAGAAAATCAAGTTCTTCGTCTGCAAGCCCTTGCTGTTTCTCCAAC TGGAAAAGCTCTATCTGGTGGGCCAAAGACAGTGAATATTCATAGGACACCAGAAAAAGGGAATGCTCTAAATGGTGGAGAAAAAGATATATCAGGTATG ACTATCGCTGTATCAAATGTACGTGAACCTGAATCTGAGGGAAAACCACAGAAATTTCTCAATGAGAAGCAGCAAGAGAATCAAGACTTGTTGATCAAGT GCATATCACAGGATTTGGGGTTTTCTGGTGGCAAACCTGTTGTTGCGTGTGTTATATATAGATGCCTTCTTCGCTGGAGATCATTTGAAGTCGAAAGAAC GAATGTCTTTGACCGTATCATTAAAACAATTGCTTCAGTTATTGAGGCTCAGGATAATACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTG TCGTTGCTACTCCAACGAACGCTCAAACCAAGTGGGACAGCTAGTTCTACACCTCAACGGCGAAGAACATCATCATCTCCTCTGTTTGGAAGAGTGTCTC AGGGGATGAGGGCATCTCCCCAAAGTTCTGTGTCACCATTAAACAATAGAGGACTTGGCAGATTGAATGATTTACGACAAGTGGAAGCAAAATATCCTGC ACTTCTGTTTAAGCAACAACTCACTGCCTTCCTTGAAAAAATATATGGAATGATAAGAGACAATCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGT ATACAGGCTCCTAGGACCTCACGTCAAAGCTTAGTAAAAGGGCGGTCACATGCTAATGCAGTTGCTCAACAAGCTTTAATTGCTCACTGGCAAAGTATTG TGAAAATCTTAAACAATTATCTGAAGATAATGAAAGCAAATTATGTACCTCCTTTTTTGGTCCATAAAGTGTTCACTCAAATCTTCTCATTCATCAATGT TCAATTATTCAACAGTCTTCTGTTGCGTCGGGAATGTTGTTCGTTCAGCAATGGGGAGTATTTAAAGACAGGCTTAGCTGAACTAGAACAATGGTGTGTT GAGGCAACAGCGGAGTATACTGGCTCAGCTTGGGAGGAACTGAAACATATCAGGCAGGCTGTTGGATTCTTGGTGATGCATCAAAAACCCAAAAAATCCC TGAATGAAATAACATTGGAGCTATGTCCCGTTCTCAGTATACAACAGTTATACAGGATTAGTACAATGTACTGGGATGATAAATATGGCACACACAGTGT ATCTACAGATGTTATATCAAGCATGAGAACTATGATGTCTGAGGACTCTAATAATGCTGCCAGCACTTCTTTCCTATTGGATGATGACTCAAGCATTCCA TTTTCGGTGGATGATATTTCCAAATCCATGCAAGAAGTAGAAATAGCTGAGGTGGATCCTCCTGCGTTGATGCGCGAGAACTTAGGATTTGGGTTCTTAC TAGCACGCTCAGAGTGATGCTAATTATCAATAATTATTGCCTCTGATGCTCCTTTTTACCGCACAAAGTTTCAAGTGCCGAAAACTGTGCATATAATTTC ACTGTGGTCAAGTGTATATATTTTCACCAACTCAGGCTTCTGATATTGGTTTGTGGCCTGGGTTAATTCATTTATACCCCTCAAGTTTCATCAACCTAGG GGTTTTGCTAAGAAACCATGTCACACAAATTAATGTGATAAATGGCCATCATATGTAGAGAGGTTGTTGTCCAGACACTGCTGGCACACATGCCCAGTGT TATTTTCTCATGTTGATGGTTTTCAAGTGTTATACAGGTGAGTGTAATTAGTGACTTGAGATGTTTGTTGTAGGGCATCTTAGTCTTGTGTGGTTATAAT TTGTATTTAATTAATTGGTATCATATTATTATTTTTATTTAAATTTAAATACTAGGTATTTTTTGTGTCTGCAATGACTGAGTTATATGAAAGATGACTC GGTGCACCTGTACAGACGTGAGATTGTTGATTTGAGTTTTCATTTCATTATTTTGTTTTAATATATCATTCTTTTCTATGATATGAGACAAACATTATAT CTAATTTTGTTTCTTGATATGTATATTTAAGAAAAAGCTCATTTAAAGTGATCTTATCATAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_195417; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479452
| Blastp | Myosin-17 from Arabidopsis with 74.58% of identity |
|---|---|
| Blastx | Myosin-17 from Arabidopsis with 73.83% of identity |
| Eggnog | myosin heavy chain(COG5022) |
| Kegg | Link to kegg annotations (AT5G20490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414422.1) |
| Pfam | DIL domain (PF01843.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |