Ll_transcript_479435

• Id Trinity: TRINITY_DN52767_c1_g1_i4
• Name Transcript: Ll_transcript_479435
• Sequence: TAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATAT ACCAAAGAAAAGATCAATTGGAGTTACATAGAGTTTATTGACAACCAAGATGTTTTGGATCTCATTGAGAAGAAACCTGGAGGAATAATTTCACTTCTTG ATGAAGCTTGGTATGCAGCTAATAGCGAAATCATTCTGAATTTGACATTGCTTTCAATTTAGTTTGAAGTCTATGCTTATATATTTTGTGAATTAACATT TTTTAATGTGGTTTCTTTCTTAGACTTCTTCGGGGATTGCCTGTGAATTATAGCTTGATTGAACTCATAATAGTATGGTTTTGTGACACAGTATGTTTCC TAAGTCTACACATGAAACATTTTCTCAGAAGTTGTACCAGACATTCAAAAACAACAAACGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACAATA TCTCATTATGCAGGGGAGGTGACATATTTGGCTGATCTGTTTCTTGACAAAAACAAGGATTATGTTGTCGCAGAACATCAAGATCTACTGACAGCCTCAA AATGCTCATTTGCAGCAAGTCTATTCCCTCCTTCTCCAGAAGAGTCTTCAAAATCATCCAAGTTCTCTTCAATTGGATCTCGCTTTAAGCTACAACTTCA GTCTTTGATGGAGACCCTAAGTTCAACCGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTTAAGCCTGCTATTCTTGAAAATGTCAATATT ATGCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGCTATCCTACCAGACGGACTTTTTATGAATTTCTTAACCGATTTG GTGTCCTTGCCCCTCAAGTTCTGGATGGAAAGTAGAGCTCATCTCTTTTTTATGCTGTTTTATCATTGTATTTGAACATGACTTTTCTTTTTTACATGCA AAACTTGTTTGTCTTGTATGTCTTGATTTCTAGGGGGTTGCTGTATGATTTAATGCCCTCTCTTTTTTGTCTTGATTTCTACTTGTTCCTTTTCAGCTCT GATGACAAGGTTGCATGCCAAATGATTCTAGATAAAGTGGGTATGAAAGGCTATCAGATTGGGAGGACAAAGGTTTTCCTAAGAGCTGGCCAGATGGCTG AGCTGGATGCAAGAAGAGCAAAGGTTCTTGGAAATGCAGCTAGAGTCATCCAGGGGCAAATACGTACCCATATTGCACGCAAAGTGTTCATTGAATTGCG TCAAGCTGCAATTCGTGTGCAGTCTAATTTGCGAGGATTGCTATCCCGAAAGCTCTATGAGCACCTGCGACGTGAAGCAGCAGCTGTAAAGATAGAAAAG AACTTCAAACGATACATCGCCTGGAAGTCTTACGTAACAGAACGGTCATCTGCAATTATATTACAGACAGGTTTAAGGGTTATGAAGGCTCGTGATGAAT TTAGATTTAGAAAGCAAACAAAGGCTGCAATTCATATTCAGGCTCGTTTGCGTCGACTACTTGCATATTCATATTTTAAAAGATTGCAAAAGGCTGCAAT TTTTACTCAGTGTGGCTGGAGGAGAAGGGTTGCTAAGAGGGAACTTAGAAATCTTAAGATGGCTGCAAGAGAAACGGGGGCCCTTAAAGAAGCAAAAGAC AAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGACAAGGCACAAGAAATTGCCAAGT TACATGATACTTTGCATACAATGCAAAAACAAGTAGAAGAAGCAAATGCCAGGGTTATCAAGGAGCGTGAGGTGGCACAAAAGGCCATTGAAGAAGCACC TCCAGTCATTAAGGAAACTCCTGTAATAATTCAAGATACTGAGAAGATTAATTCTTTAACCGATGAAGTCAAAAGTTTGAAGGAATTGTTGCTATTGGAA AGAGAGGCTAAAGAAGAGGCCAGGAAGGCTGAGGCTGAGGCTGAAACCAGGAATAAGGATCTGCTTAAAAAAGTTGAGGATTCTGATCGCAAAATGGAAC AACTCCAGGAACTGATTCAGAGATTGGAGGACAAAATTTCCAATTCGGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCACTGGCTGTATCACCAACTGG AAAAGCTCTGCCTG
• Tissue: pods
• Gene name: LI_gene_195417;
• Additional information: details;

Expression of Ll_transcript_479435

FPKM

• PAB: 0.2
• PNAB: 2.2
• PS1: 2.2
• PS2: 2.5
• PS3: 2.5
• PW1: 2.4
• PW2: 2.9
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479435

• Blastp: Myosin-17 from Arabidopsis with 68.38% of identity
• Blastx: Myosin-17 from Arabidopsis with 65.84% of identity
• Eggnog: myosin heavy chain(COG5022)
• Kegg: Link to kegg annotations (AT5G20490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463633.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;