Id Trinity | TRINITY_DN52767_c1_g2_i1 |
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Name Transcript | Ll_transcript_479431 |
Sequence | ATATCCTACCAGGCGGACCTTTTATGATTTTCTTAACCGATTTGGTGTCCTTGCACCTGAAATCCTGGATGGAAAGTAAAGCTCATTTTTTTGCTGTTTT TATCTTTGAATTCGAAAATGACTTTTCTGGTTTTCATGCAAAAGCTTATTTGCCTTGTTTGTCTATTGGTTTTTAGGGAGTTACTTATGATTTAACTCTT GCCCTCTTCTTTTTTTGCTTGCATCTTATCTACCTTTATTTCATACATGTTTCTACTTGTTCTCTTTCAGTTCTGATGACAAGGTTGCATGCCAAATGAT TCTAGATAAAATGGGTATGAAAGGCTATCAGGTGATTCAATGGTCCTTATAACTTGATACGTTGATGATGGTCATTGGAGGTTCAGTTTTAGAAATGAGG TTTAGCAAGCCAAGCCCAGCTGTTTTCACAATTAATTGGCATCTTGCATATTTACACCTATAAAATTCATACTGGTGGTCATTGGAAGGACTCAAATATC TTAAGAGGCCTATGGAGCCTCTGAAGTAACCTTATATATTTCATGTAGACTACCCAGCGATAACTTTTTTAGGAAAATACCAGATATAAGTATGAAGTTT GTTTGCACAATACTGGAGTTATTTGACCCATTTCATTAAAAGTGTTGGTTCTATAACCTCTGCTTAACTTATATAACTTCTCCTGAAATTCTGGATTGGA AACTAGCTTTATTTTTAGGTCATGAATATTAACTTTTGCATCTAGTAATGTATCATACTATGAGGAGTTTATCCATACAAGTTGATTTTGCAAATCAAGA ACTTCACCAAAATATATAATGGTTTATCAGATAGGGAAGACAAAGGTTTTCCTAAGAGCTGGCCAAATGGCTGAGCTGGATGCAAAAAGAGCAAAAGTTC TTGGAAATGCAGCTAGAATCATCCAGGGGCAAATACGTACCCATATTGCACGCAGAGAGTTCATTGAATTGCGTCAAGCTGCAATTCGTGTGCAGTCTAA TTTGCGAGGATTATTGTCCCGAAAGCTCTATGAGCAGTTGCGGCGTGAGGCAGCAGCTGTGAAGATAGAAAAGAACTTCAAAGGATACATCGTCAGGAAG TCTTACACAACAGAGCGACTGTCTGCAATTATATTGCAGACAGGTTTAAGGGCCATGAAGGCTCGTGACGAATTTAGATTTAGAAAGCAAACAAAGGCTG CAATTTATATCCAGGCTCGTTTGCGTCGGCTATTTGCATATTCATATTTTAAAAGATTGCAAAAAGCTGCAATTGTTACTCAGTGTTGCTGGAGGAGAAG GGTTGCTAAGAGGGAACTCAGAAATCTTAAGATGGTTTGAATGATATTTTTGTGTGTTTAATATGGACATAATCTTGGTTTGTAAGACCTTACTTCAGAA GTAATAATGTGTAATTGCATTCAGGCTGCAAGAGAAACGGGGGCCCTTAAAGAAGCAAAAGACAAACTAGAAAAGCGTGT BLAST |
Tissue | pods |
Gene name | LI_gene_195418; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479431
Blastp | Myosin-5 from Arabidopsis with 64.12% of identity |
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Blastx | Myosin-5 from Arabidopsis with 54.35% of identity |
Eggnog | myosin heavy chain(COG5022) |
Kegg | Link to kegg annotations (AT1G17580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463633.1) |
Pfam | IQ calmodulin-binding motif (PF00612.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |