Ll_transcript_479527

• Id Trinity: TRINITY_DN52768_c0_g1_i6
• Name Transcript: Ll_transcript_479527
• Sequence: AATTTATGGAAAGACATACAGTCTCCAAACTCATCGGTTCTCCTCCTGGATATGTTGGTTACACCGAGGGTGGTCAACTGACTGAGGCAGTTCGGCGTCG TCCCTATACTGTTGTACTCTTTGATGAGATTGAAAAAGCCCATCCTGATGTATTCAACATGATGCTTCAGATCCTGGAAGATGGAAGGCTAACAGACAGT AAGGGAAGAACTGTGGACTTCAAGAACACACTTCTTATAATGACATCAAACATTGGAAGCAGTGTGATAGAGAAGGGAGGTCGTAAAATAGGATTTGACC TTGATTATGATGAGAAGGATAGCAGTTATAACCGAATCAAAAGTTTGGTGACTGAGGAGCTAAAACAATACTTTAGACCAGAGTTTTTGAATAGATTGGA TGAAATGATTGTTTTCAGGCAACTCACTAAACTGGAGGTGAAAGAGATAGCAGACATTATGCTGAAGGAGGTGTTTGAGAGATTGAAAACAAAAGAGATT GAGCTTTCAGTGACAGAGAGATTTAGGGAAAGAGTGGTTGATGAAGGTTATAATCCTAGTTATGGAGCTAGGCCTCTAAGAAGAGCTATAATGAGGCTTT TGGAGGACAGCATGGCCGAAAAGATGCTTGCTAGAGAGATCAAAGAGGGTGATTCTGTTATTGTGGATGTTGATTCTGATGGCAATGTGATTGTGCTTAA TGGTAGCAGTGGTACCCCAGAGTCATTACCAGAGCCCCTTCCTGTATAATGTGGTTACCTCTGCTAAATAATGTGTATTTAATTCCATTTAAAACTATAG TCCTAGTCTGTTTTACTTGTCAATGGACCTATAGCTTTCTATTCAGTCATGTTTGCCCATTGCCAAGCAAAACTAGTAGGGAAATGGTGTGTTTAGTTTT CACCTGCATGTCTATGACAATGTAATATCTTAGTATTTTGTAAAATACAGTGATGGTGTATTTATTTATTATTGCTTGAAATCTCAATATATGTAATGAC AAATACTTGACAATGGCAATTAGTTCAGTACAATGCTCATCCGGC
• Tissue: pods
• Gene name: LI_gene_195423;
• Additional information: details;

Expression of Ll_transcript_479527

FPKM

• PAB: 1
• PNAB: 5.7
• PS1: 5.2
• PS2: 5.4
• PS3: 6.2
• PW1: 7
• PW2: 3.8
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479527

• Blastp: Chaperone protein ClpC, chloroplastic from Pisum with 96.37% of identity
• Blastx: Chaperone protein ClpC, chloroplastic from Pisum with 96.37% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463160.1)
• Pfam: AAA domain (Cdc48 subfamily) (PF07724.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;