Ll_transcript_481275

• Id Trinity: TRINITY_DN52769_c2_g8_i1
• Name Transcript: Ll_transcript_481275
• Sequence: CCACAGCCCAATTCTATTTTCTCCATCTTCACCACTTCAATTCTATTTCCTTTTTCCCTCTCAGCAAGACCTTGCGTAGGTGAAGATGGCGGAACACGAT AACGGTGCCAAAGCAATCGAAGATGAACCTGTTATCGGGCCGGGTCCAGCTCCTCGTTCCCGACTCAAACGACCGCTCCAGTTCGAACAAGCTTACCTCG ATACCTTACCCTCTGCTAACATGTATGAGAAGAGTTATATGCATCGTGATGTGGTTACGCATGTTGCTGTTTCAGCTGCTGATTTTTTCATCACCGGAAG CATTGATGGTCATTTGAAGTTTTGGAAGAAAAGGCCTATTGGTATTGAGTTTGCCAAACACTTCAAAGCTCATCTTGGTCCAATTGATGGTCTAGCTGTT AGTGGTGATGGCCTGCTTTGCTCTACAATATCAGATGACCGTTCTGTGAAAGTATATGATGTAGTAAACTTTGATATGATGGTGATGATCCGCTTGCCGT ATATCGCTGGCGCTGTTGAGTGGGTATACAAACAAGGGGATGTCAAAGCTATGCTTGCTGTTAGTGATCGGAACTCATCTTTTGTGCACATATATGATGT ACGAGCTGGTTCAAATGATCCTATCATCTCCAAAGAGATACATTTGGGTCCTATTAAAGTTATGAAGTACAATCCCATATATGATTCTGTAATTTCAGCA GATGTAAAGGGTATAATTGAATACTGGAGCCCTGCTACTCTTAAATTTCCGGAGGATGAGTATGTACCTATTTTTGTCTTACTATGTTCTTGCTCCAGCC ATTTTATTTAACTGACTCATCAATGTTCAAACTTGTTATGGCTCTCTGTCCAGAGTTCCTTGTCTCTTACATACAAAGACAAATATGTCAAAACTTGCTG CGACTTCAATTCATCAAGTAGTCAAACCTCTTCTAGATGCTCGATTTCTTCATTTGTTATGGTGAATGGATCAGAATCATGTAAAACCTGAGAAGTCTAA AGTCTGAATTTAGCATTTTATTTTGTTCTCAATTAAGTATTTCTTCTTTCTGTGTTGGTTTAAACACTAGGTGCGGTAGCCAAGAATGTGATCTGGATTA TCTGATTATATAAACTATTAACTGTTTTAGTTAGAGATAAAATTGACTGCTGCGAAATTGTTTAGCAATCTTATTTGAGTCGTATTGGCAAGATCTGATG GATGTAGGTTTGGATCTGATCAATTTGAACACACATTTATACATAAGATTCTCATAATACTATCGTGGATCCTTGGGGATTGCCCTGTACAGGGCCCGTG GGTGGAGATTTGTCCATTCAGGATGGGGGAGAAATTCTCCTCCGGAGGCGATTTGTGGATGGGGTGGGGATCCCCAAACACTATACAAATTGCCATCCTG TATATCAATTATCAGTATTATAATCAGCAATGGCATGAAGTGCAGATATTTCGAATGGTGTGGTTGTTGCACATTTTAACTGTAACAGTTTATTGACTTT ATTCTGCGTAGCAGTTCTGGAAATTTTTAGTTGCATGAGTTTTAGACATTTGAATTGTAATTTCATCCTTTCCTTTGGTGCTTGTAGGGTCAGCTTTAAA CTGAAAACTGATACTAACCTCTTTGAAATAATAAAATGCAAGACTTCTGTTTCAGCCATTGAGGTCAGCCCAGATGGTAAACAATTTTCAATCACATCAC CTGACCGTAGGATACGTGTGTTTTGGTTCAGAACTGGTAAACTAAGGCGAGTTTATGATGAGTCTCTGGAGGTTGCTCAAGATCTCCAAAGAAGTGACAC TCCATTGTATCGGTTGGAGGCCATTGATTTTGGCCGAAGAATGGCTGTAGAGAAGGAAATAGAGAAGACTGAAGATGCTCCACTTCCAAATGCAGTTTTT GATGAAAGTTCCAATTTTCTTATCTATGCAACCTTGCTTGGGATCAAAGTGAGCTTTTTTCGTACTTAACTCTGTTATAAAACTAATTGTACAACTATGT AATTACTTCACTTCGTTCTGTTACACAACCTCTCTACATCTGTACCTTTTCCTTCATTGCTTTAGTAGTGAGTATAGAGTAGATCTAACCTCATTCCCTA ATGTGTTTTCCATTTTCTGTATGTTTATAGATTGTTAATATGCACACAAATAAAGTTGCTCGAATACTTGGGAAGGTAGAGAACAACGATAGGTTCTTAA GAATAGCTTTATATCAAGGTGACCGAAGTAGTAAAAAAGTAAGAAAGATTCCTGCTGCTGCTGCTAATGCCAATGAGAGTAAGGATCCCTTGACAGACCC CACTCTCCTGTGTTGTGCCTTCAAAAAGCACAGGATATATTTATTCAGTCGGAGAGAACCAGAGGAGCCTGAAGATGCAACTAAGGGAAGAGACGTGTTC AATGAAAAGCCTCCTGCTGATGAACTTTTGGCAGTTTCAGATATCGGAAAGGCAGCTACAACATCACTCCCGGACAATGTGATTTTACACACAACTATGG GTGATGTTCACATGAAATTATACCCAGAGGAATGTCCAAAAACTGTGGAGAACTTTACAACTCATTGCCGGAATGGCTATTATGACAATCTTATTTTTCA CCGGGTCATAAAGGGTTTCATGATACAGACAGGAGATCCTTTAGGAGATGGCACTGGTGGTCAATCTATTTGGGGGAGAGAATTTGAGGATGAATTTCAT AAAAGTTTAAGGCATGATAGGCCTTTCACAGTGTCAATGGCAAATGCTGGCCAAAATACAAATGGCTCTCAGTTCTTTATCACCACTGTGGCTACTCCAT GGTTGGACAACAAGCACACAGTATTTGGGAGAGTTGTGAAGGGAATGGATGTTGTTCAGGGCATAGAAAAGGTGAAGACAGATAAGACAGACAAGCCATA CCAAGATGTAAAAATTCTAAACGTGACAGTACCAAAGTGAAGGTCGTTCGTTTTCATGACTTATGCAGTCGTTCATCCTTACCAGTGATAGGCAGCTGAA GAATTAGAGGTTATGTTAAGTTTCCAACTTTAGATCAACCTTTAGTTACCCAAGTTTCCATGAGCAATGGCGTTTGTTCATGTACAACATCACTTTGGCA GGGTGCAAAGTTTTCCTTCTCAGGTTTTTTCATCAGTTTTTACTCTTGGATCAGCCTCAATGATGCTTTATGTTTCATGCTTTGCCAGTGCAATATGCTA TGCATGCCAAAGGATTGCGCTTAAGCAATATCACTGTTTAACTTCTAATGTTCTAATACTATACCTGATGTACGGTATTCCTGCTTTATTATTATTTTCA GCTGAGGCTTGATTTGTTTAGCTGAAAACCTTCATTATTTGTGTCTGTACGTTTTTCTATACTGCCAGTACGATGCTTCCAAATGGTCTCTGTATTTATA TACTTTTTTGCTTCAATCTTTGAGTAGCTATCCATCAACTCTCCAAAACGTATTAAAGCGTTCAGGGTGCAAAATTTTAATGATGCTATTTTTCTGACAA TTTTTAATTTAGTTATTGTATTTGTTAGTGTAATTTGTGTATAAATGTTGCATAGGAAATACAAAGTTTG
• Tissue: pods
• Gene name: LI_gene_195437;
• Additional information: details;

Expression of Ll_transcript_481275

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.4
• PS3: 0.8
• PW1: 0.1
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_481275

• Blastp: Peptidyl-prolyl cis-trans isomerase CYP71 from Arabidopsis with 88.35% of identity
• Blastx: Peptidyl-prolyl cis-trans isomerase CYP71 from Arabidopsis with 87.73% of identity
• Eggnog: peptidylprolyl isomerase domain and WD(ENOG410XQB4)
• Kegg: Link to kegg annotations (AT3G44600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435303.1)
• Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;