Ll_transcript_479714

• Id Trinity: TRINITY_DN52774_c3_g6_i2
• Name Transcript: Ll_transcript_479714
• Sequence: AAAAGAAATCCAAAGGCATCTCAAAATCATCAAAAAGGAAATCTTCCAAAGCTAAAACATTGAGACCCCAGAGAATTGCTGCTCGCAATGCTCGTAATAT GTTGTATCAAATTAGTGATACCGATGGGGAAGATGATATTTCTGAAGATGAATCATCAGGCAGTTTGGAAGATTCAGACATTCTCAGTGAACATGAGAAG AAAGTGCATAATAAACATGATCAACTTAAAGAACCATCTTTTGAAGAATTTGCCAATGTAGCTAAGCCTCCCGCAGATTCCACATCTCAGGTAAATGTTG AAACAAAACAGAGACTAGTTCTAAAGTTTACTCTTCGTGATTCTAAGAAGAACATGCCCATGAGACTGGCATGTGAGACGCAGGCGAAAATGGGTTGTCA GTCTTCGAAACACCAAAAAAGTGATCAAGAAACTTCTGCAGAGGTGACCAATGCCAAACATCCCCAAAACCACAACTCAGATGAACACACTGATAAATCA CAAGCTGAAAGTGATCATCTAGACACATCTGTAAGTGTTGAGAGGAACATGTGCAGACAAATGCATCCACATTCAGGATCTGGGGATGGTTTTCAGATTG ACACTGAACTTGATGGTCATCATGAACACAATGCCAATGGGAGATTTTATTGTATGTCCCAAAAGTTCGATACTGTAGGCAGCATGGTTGACACAGGGCC AGCTGACATTGATAACACACTTAAGGTTTCATCAGCTGAGACTTCATTGCTTGGCGATCATGATGGATCCTTGATGTCTGGTTATGAGTTGAATTATTGT GATAAAGGCCCGCCTGGATTTAACAAATGCACAGAGGACGTGGTGGAAAACAATGATGTAGTTCATTCAAGCCACTCTCGAGATCTCAAAATGAAAGCTC CAATGAAAGCAAGAAAGATAGTTATTAAAAAGAAACAGCCCTTAACAGACATTGAAGGTCCTTGTAAACTGAAATTTTTTAGTTCTCAGGCTTATTCAAC AGGTGCTAGAGGTGACTTAATCTCAGGAAATTCTTCTTTTGTGGGGCCTAACCTAGTTGTGGAAGTGCCAGAAGAAGCTGAACGTGACGTAAAATTAAGT TCTCCAAAGTTACCGCATTCATATTCAGGCAGGAAAAGTTATAATCACGCCGAGGAATGGAACAAGTCACATAAGGGTAAAGTCTTGCCAGGTGGTTCTG GTTGTGATCTGGAAGAAAATACTTCAATTTTCAGCAATCAACATGGTTTTGGAATTGGTCCATCAGATGTTGCAAATGATCCAAGACGTCGAACACGATC TATGAGGATGGAGACAACTTCCGACGAGCCAAATGCATTGAACCTAAGAATTAAGGTTCGAAGGGGCCAAGATTCCAGGGGCACATCTAGTCTGGAAGGT TCTTCCATTAATGTGCCGGATCAACTTCATCAAAGAAAAAGGGCTTCTAGAAACTGGCTTGATGAATATATTGCTAATGACCCTGGTATTTTAACTCGGA TGTCAAATCTCAATGAAAAAAAGTTGTCATGGTTAATGTTCTCAGAGCAGGAGGAGGGTTACCGGTTTATTCCTCAACTTGGTGATGAAGTATTATACAT GAGACAGGGCCATCAAGAGTACATAGAGTCATTTATGCCGAAAGAATCAGGTCCATGGAAATTATTTAAAGGACTAAGTGCTTCTGAAATTTGCAAGGTT GAAGAGCTCGAGTATGCTGTGCTCCCAGGTTCTGGGGATAGCTGTTGTAAACTCATACTTAGATTCGTAGATCCTTCTTCACGTGTCCATGGCAAAGTTT TCAAATTAACTTTGCTTGAATTGATTAACTTTGCTGATTTCATTGTTGAGAAAACATGGTATGATACTGCTATAAACAGAAACTGGTCTTTAAGAGATAA ATGCTTAGTCTGGTGGAGAAATGAAGACGGGAAAAGTGGAAGTTGGTGGGATGGTCGAATTACTGCAGTGCAAGCCAAATCTCATGACTTTCCTGACAGT CCTTGGGAACGGTATCAAGTCCAGTACAGGACTGATCTGACAGAAACTCATCTGCACAGTCCGTGGGAACTATTTGATCCTGAGATTAAATGGGAGCACC CCTGCATTGATCCTGAGATTAGAGATACCCTTCTGTCCTATTTCACTAAATTAGTCCACCGGGGCTATGATATCCAGGCACTAGACCAACTAGCGGAGAA GTCGGAGTTTTCAAACAGGTTTCCCGTTCAATTCTATCCTGAACTGATTCAAACAAGATTGAAGAATGACTACTATCGGAGAGTGGAAGCTGTTAAGCAT GATATAATGGTGATGCTCTCAAGTGCTGAGGAGTACTATACAGTGTCAAAAAATGTTCAGTTCTCGACCATGGTTAGGCGAATGTCAGATTGGTTTAGAA GGAAACTTGATAGGTTACAGTAAACTCAATATGGATTTTTTAGGTTTCTTTTAACATTGTTTTCCATTCATTGAACCAATTTTGGTGAACTGGTTCTTCC ATGAGCAATGATTTTATAGAGTGGAGAAGGCCATAGGTGGTGGTAAATATTAGTTGCCACACTCGTGTGTAAATATACAAGCCACATCTTTGGCTTTATG GCGTTGTTTGTGAATTTGGACGTTGTTGTGGTTTTGCCTAGGTCACAACTAAAGTTGTGTTTAAGTTCTAGGCATTTGCTTTAATATGTCTCTATTTTTT CCTCTACTTTTCATAGATAAGCTAAATTTCTTCATCATTTTTAATCTAGTAATGTGGATTTGCCG
• Tissue: pods
• Gene name: LI_gene_195486;
• Additional information: details;

Expression of Ll_transcript_479714

FPKM

• PAB: 0.6
• PNAB: 1.3
• PS1: 1.3
• PS2: 0.7
• PS3: 1.6
• PW1: 1.3
• PW2: 1.1
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479714

• Blastp: Bromodomain and WD repeat-containing protein 1 from Mus with 27.85% of identity
• Blastx: Bromodomain and WD repeat-containing protein 1 from Mus with 33.33% of identity
• Eggnog: wd repeat(COG2319)
• Kegg: Link to kegg annotations (93871)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452355.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;