Ll_transcript_479506

• Id Trinity: TRINITY_DN52776_c3_g1_i2
• Name Transcript: Ll_transcript_479506
• Sequence: CAACAACCCCTCCTCTTTGAGATACCCCATTACGCTCCGAACTCTTGATTGAGTCTTTATTACGAACAGCTTCACGACAAATCTTCCACAACCTCACACA CACATCACAATCATGGCTCCCGCTATCGGTATCGATCTTGGTACTACCTACTCTTGCGTGGGTATCTACCGCGATGACCGCATTGAGATTATCGCCAACG ACCAGGGTAACCGCACCACCCCCTCGTTCGTTGCCTTCACCGACACCGAGCGCCTCATCGGTGACTCCGCCAAGAACCAGGTCGCCATGAACCCTCACAA CACCGTCTTCGACGCCAAGCGCCTCATTGGCCGCAAGTTCCAGGACGCCGAGGTCCAGGCCGACATGAAGCACTTCCCCTTCAAGGTCATCGAGAAGGCC GGCAAGCCCGTTACCCAGGTCGAGTTCAAGGGCGAGACCAAGGACTTCACCCCCGAGGAGATCTCCTCCATGATCCTCACCAAGATGCGCGAGACCGCCG AGTCCTACCTCGGTGGCACCGTTAACAACGCTGTCATCACCGTTCCCGCATACTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCTGGTCTGATCGC CGGCCTCAACGTTCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCCTACGGTCTTGACAAGAAGCAGGAGGGTGAGAAGAACGTCCTCATTTTT GATCTCGGGGGTGGCACCTTCGATGTGTCTCTCCTCACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTGACACTCACCTTGGTGGTGAGG ACTTCGACAACCGTCTCGTCAACCACTTCAGCAACGAGTTCAAGCGCAAGCACAAGAAGGACCTCAGCGCCAACGCCCGCGCCCTCCGTCGTCTCCGCAC TGCTTGCGAGCGCGCCAAGCGCACTCTCTCTTCTTCCGCCCAGACCTCCATTGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACT CGTGCCCGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCGGCACCATGGAGCCCGTCGAGCGCACTCTCCGTGACGCCAAGATCGACAAGTCCTCTGTCC ACGAGATCGTCCTCGTCGGTGGTTCCACTCGTATCCCCAAGGTCCAGAAGCTCGTCTCCGACTTCTTCAACGGCAAGGAGCCCTGCAAGTCCATCAACCC CGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTCTCTGGTGACACTTCTTCCAAGTCCACCAACGAGATCCTTCTTCTCGACGTCGCG CCTCTCTCCCTCGGCATTGAGACCGCTGGTGGTGTCATGACCGCCCTCATCAAGCGCAACACCACCATCCCCACCAAGAAGTCCGAGACCTTCTCCACCT TCTCCGACAACCAGCCTGGTGTCCTCATCCAGGTCTTCGAAGGCGAGCGCGCTCGCACGAAGGACAACAACCTTATGGGCAAGTTCGAGCTCTCCGGCAT CCCGCCTGCGCCCCGTGGTGTTCCTCAGATCGAGGTCACCTTCGACCTTGACGCCAACGGAATCATGAACGTCTCCGCCCTTGAGAAGGGTACCGGCAAG ACCAACAAGATTGTCATCACCAACGACAAGGGCCGCCTTTCCAAGGAGGAGATCGAGCGCATGCTTGCTGACGCCGAGAAGTACAAGGAGGAGGATGAGG CCGAGGCTGGCCGCATCCAGGCCAAGAACGGCCTCGAGTCCTACGCCTACTCTCTCAAGAACACCGTCTCCGACCCCAAGGTTGAGGAGAAGCTGTCCGC TGAGGACAAGGAGACCCTCACTGGCGCCATCGACAAGACTGTCGCCTGGATCGACGAGAACCAGACCGCCACCAAGGAGGAGTACGAGGCTGAGCAGAAG CAGCTCGAGAGCGTTGCCAACCCCGTCATGATGAAGATCTACGGCGCTGAGGGTGGTGCTCCCGGTGGCATGCCCGGCCAGGGTGCCGGCGCTCCCCCGC CCGGTGCTGGCGATGACGGCCCCACCGTCGAGGAGGTCGACTAAGCGTCTCGCCCCTCTACGATACCCAACCTGCATCGACAACATGGCGTTAACGATTA GAAGGTCTTTTCTGCTTTGCTTTGCTTCGGTTTCAAACTTGATGATACAACGACTTGGTGGACACAAAAAGCATCCCCCTGTAATGTAGCTTGCCTCCTT TTGAGGCTTTTTCCAAATTAAAACTTTCTGTT
• Tissue: pods
• Gene name: LI_gene_195496;
• Additional information: details;

Expression of Ll_transcript_479506

FPKM

• PAB: 0.8
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.6
• PW2: 2
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479506

• Blastp: NAD-specific glutamate dehydrogenase from Achlya with 46.98% of identity
• Blastx: Heat shock 70 kDa protein from Cladosporium with 97.7% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015963027.1)
• Pfam: NAD-specific glutamate dehydrogenase (PF10712.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;