Ll_transcript_480114

• Id Trinity: TRINITY_DN52782_c2_g2_i1
• Name Transcript: Ll_transcript_480114
• Sequence: CTTAAGTAATCAAAACGACAAAAGTCTTATTTAGTTGGGACGTGAGAGGAGGGAAAAGAAAGAACACACTAACATGTCTCTCTCTCTGTCTATACTGTGT TTCTGTCTCCTTTCATAGCTTCGTTCGTCGTTTGTTGTCTATTATCTCCCACTGTTCCTGTCGTTTCATCAACACTACACTATTCTCCTTCGCTCTGTGT TTTTGGAAAACAATATATTGGTGATAAGGGAGGAGTTTGATCAATTCTTAGAGGTATGTGTGAATTGTCAAATTTAACAACCTTGAACTGAAATCTTACT GAAATGACACGAGGGAGGATCAGGGCGAAGCTCCGGAGGAGCCATCTTTACACGTTTGGTTGCATTCGCCCAACCACCATTGATGAGTTGCCTAATCCAC TTAATGGCCCAGGGTTCTCAAGAACAGTTTATTGCAACCAGCCTCAAATCCATGACAAGAAATCTCTATTTTACTGCAGTAATAATGTGTCAACTACTAA ATACAATGTTATCACATTTTTTCCAAAGGCACTCTTTGAACAATTTCGAAGGGTTGCTAATATATACTTCCTTCTGGCTGCGTGCCTATCAGCCTCTTCG ATTTCACCATTTAGCCCATTGAGCATGATTGCTCCTTTGGTGTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGGGTTGGAAGATTCTCGCAGGTTCCTTC AGGATGTCAAAGTTAATCACCGGAAAGCTAGCATCCATAAAGGCGATGGCGTTTTTGGTCCCAGGTCATGGCAGAATATTATGGTTGGGGATATCATAAA AGTGGAGAAGGACCAATTTTTTCCATCAGACTTACTTCTCTTGTCATCAAGTTATTACGAGGATGGGATATGCTACGTGGAGACGATGAATTTAGATGGT GAGACCAACTTGAAGGTGAAAAGATGTTTGGAGGCTACATTGTCTCTAGATAATGATGAGGCTTTTAATGGTTTCTCAGGAACATTACATTGTGAAGACC CAAATCCGAACCTTTATACTTTTGTTGGAAACTTTGAGTATGAGCATCAGGTTTATTCTATTGACCCCAATCAAATTCTCCTCCGAGATTCAAAGCTTAG GAATACTGATTATGTCTATGGGGTGGTCATTTTCACTGGTCACGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGGAGTACAATAGAG AAAAAGATGGATTATATCATATACGCTCTTTTCACTGTGCTTATATTAATATCCTTTATTAGTTCAATAGGATTTGTTGTGAAGACCAAGTATCAAGTCA CAAAATGGTGGTACTTACGACCTGACGACATTGAAGACCAGTATAACCCAAGGAAAATTGAATTGGCTGGGATGAGCCATCTGATTACTGCTCTCATTCT TTATGGATATTTGATACCTATCTCGCTTTATGTTTCAATTGAGATTGTGAAGGTATTACAAGCAACCTTCATTAACAAAGACATTCATATGCATGATGAA GTAACTGGGACCCCAGCTGATGCACGAACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACTATCCTCTCTGATAAAACTGGCACTTTAACCTGCA ATCAGATGGATTTTTTGAAGTGCTCCATTGCTGGTACTGCATATGGTGTGTGTGCTAGTGAAGTTGAACTTGCTGCAGCAAAGAAGATGACTTCTGATAG TGATGAGCAGTATTCTGATCTCTCTAATTTCCCTGCGTCCAAGAGTAACACACCATCAAAAAAGGCTACAGTGGGTGAAGAAATTGTAGTGGAGACTATT GTTACTTCCAAGGATGATGAGCATCAAAAGCCTGCCATAAAGGGATTTGGTTTTGAAGACAACCGTCTCATGAATGGTAACTGGTTGAACGAACCCAACA GCGACGTTCTTTTGATGTATTTCCGGATATTAGCAGTTTGCCATACTGCAATTCCTGAGCTGAATGAAGAGACTGACAGTATTACATACGAAGCTGAGTC ACCTGACGAAGGGGCTTTTCTTGTAGCAGCTAAAGAATTTGGTTTTGAATTTTATAGAAGAACTCAATCCACTGTTGTAGTGCGTGAAAGATTGGCTGCT TCAGAACAAGTGGTTGAAAGAGAGTATAAAATCTTGAATCTGCTGGACTTTACTAGCAAAAGAAAGCGCATGTCTGTGATTGTACATGATGAGGAAGGAA ATATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCG
• Tissue: pods
• Gene name: LI_gene_195547;
• Additional information: details;

Expression of Ll_transcript_480114

FPKM

• PAB: 0.2
• PNAB: 2.1
• PS1: 3
• PS2: 1.1
• PS3: 2.5
• PW1: 1.7
• PW2: 1.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480114

• Blastp: Probable phospholipid-transporting ATPase 7 from Arabidopsis with 69.35% of identity
• Blastx: Probable phospholipid-transporting ATPase 4 from Arabidopsis with 68.83% of identity
• Eggnog: Phospholipid-transporting atpase(ENOG410XPYK)
• Kegg: Link to kegg annotations (AT3G13900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436506.1)
• Pfam: Phospholipid-translocating ATPase N-terminal (PF16209.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;