Ll_transcript_480132

• Id Trinity: TRINITY_DN52782_c2_g2_i19
• Name Transcript: Ll_transcript_480132
• Sequence: TGACAAAACCTTAATCATGATGGAAGAAACCACTCTCCTTCTAAATATTTGCGTTCATTCTTCTTTTTATTTTTCCCTCAATGCGTTTTCCACTATTCTC CCATTTTCCAGGTTTTAGGAAAATAACAAATTGGTGTGATAAGGTTGAAAAGTTTGATTATTCCTTAGAGGCAAAGATTTTAGTATGTGTCAACTGTCAA ATTTAACTACCTTGAGCTGAAATGGCACGGGGGAGGATAAGGGCGAAGCTCCGAAGGAGCCATCTTTACACATTCGGTTGCATTCGCCCTACCACCACCG ATGATTTGCCTAACCCGCTTCACGGTCCTGGGTTCTCAAGAACAGTATATTGCAACCAGCCTCAAATCCATGACAAGAGACCTCTATCTTACTGCAGGAA TAATGTATCAACCACCAAATACAATTTTGTCACATTCTTTCCTAAGGCACTCTTTGAACAATTTCGAAGGGTTGCTAATATATACTTCCTTTTGGCTGCA TGCTTGTCAGTCTCTTCGATTTCGCCGTTTAGTCCTTTGAGCATGATTGCTCCTTTGGGGTTTGTTGTAGGGCTTAGTATGGCGAAAGAAGCATTGGAAG ATTTTCGCAGGTTCCTTCAGGATGTCAAAGTTAATGGCCGAAAAGCTAGCATCCATAAAGGTGATGGCGTTTTTGGTCCCAGGGCATGGCAGGATATTAT GGTTGGGGATATCATAAAAGTGGAGAAGGACCAATTTTTTCCATCAGACTTACTTCTCTTGTCATCAAGTTATGAAGATGGGATATGCTATGTTGAGACG ATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATGTTTGGAGGCTACCTTATCTCTGGAAAATGATAAAGCTTTTGAGGGTTTCTCAGCAACAA TACATTGTGAAGACCCAAATCCGAATCTTTATGCCTTTGTTGGCAACTTTGAGTATGAGAATCAGGTTTATGCTCTTGATCCTAGTCAAATTCTCCTCCG AGATTCAAAGCTTAGGAATACTGATTATGTCTATGGGGTGGTCATTTTCCCTGGTCACGATAGCAAAGTCATGCAGAATTCTACAAAATCACCTTCAAAA AGGAGTACAATAGAGAAAAAGATGGATTATATCATATACATTCTTTTCACTGTGCTTATACTGATATCCTTTATTAGCTCAATAGGATTTGTTTTCAAGA CCAAGTACCAAGTCACAAAATGGTGGTACTTACGGCCTGACAATATTGAAGACCAGTATAACCCCAGGAAAATTTTATTGGCTGGGATGAGCCATCTGAT TACTGCACTCATTCTTTATGGATATTTGATACCCATCTCTCTCTATGTTTCAATTGAGATTGTGAAGGTATTACAAGCAACCTTCATCAACAAAGACATT CACATGTATGATGAAGTAACTGGGACTCCAGCCAATGCGCGGACATCAAATTTGAATGAAGAGTTGGGCCAGGTAGACACTATCCTCTCTGATAAAACTG GCACTTTAACCTGCAATCAGATGGATTTTTTGAAGTGCTCCATTGCTGGTACTGCATATGGTGTGCGTGCTAGTGAAGTTGAACTTGCTGCAGCAAAGCA GATGGCTTCTGACATTGAGGATCAGGATTCAGATCTCTCTAATTTCCCCATGTCTAAGAGTAACATGCAATCAAAAATGGTTCCAGTAGGTGAAGAAATT GTACTGGAGACTATTGTTACTTCCAAGGTTGATGAGAACCAAAAGCCTCCCATAAAGGGATTTGGTTTTGAAGACAACCGTCTCATGAATGGTAACTGGT TGAACGAACCCTATGCCAATGTTCTTTTGATGTATTTCCGAATATTAGCAGTTTGCCATACTGCTATCCCTGAGCTAAATGAGGAGATTGACAGTATTGC ATACGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTCGCAGCTAGAGAATTTGGTTTCGAGTTTTATAAAAGAACTCAATCAACCGTTGTAGTACTT GAAAGATTCGCTGCTTCAGGACAAGTGGTTGAAAGAGAGTATAAAATCTTGAATCTGTTGGATTTTACTAGCAAAAGAAAGCGTATGTCTGTGATTGTGC ATGATGAGGAGGGAAGCATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAACAATATTTGGAGGCTACTAC TAAACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTACAGAAAGCTTGATGAGCAAGAATTCTCTGATTGGAATAATGAGTTT CAGAAAGCTAAGACAGCTGTTGGGCCTGACAGAGAGGCGATGCTTGAGCGGTTATCAGATATTATCGAAAGAGAGTTGATTCTTGTCGGGGCTACTGCTG TGGAAGATAAACTACAGAAAGGGGTGCCTCAATGCATCGATAAACTTGCCCAAGCTGGTCTAAAGATCTGGGTATTGACAGGGGATAAACTGGAAACTGC AATCAACATTGGATTCGCTTGTAGTTTGCTACGACAGGGCATGAAGCAAATCTGTATCACTCTCCCAAATTCAGATTCACTAACCAATGATAGCAAAGAG GTTATTAAAAGCAATATCTTGACTCAAATCACCAATGCCTCACAAATGATAAGACTGGAAAAGGATCCTCATGCGGCATTTGCATTAATTATTGAAGGGA AAACTCTCACATACGCTTTAGAAGATGATGTCAAGCATCATTTTTTGGGATTGGCTGTGGATTGCGCATCTGTCATTTGCTGTCGTGTGTCTCCCAAGCA AAAGGCACTGGTAACAAGGTTAGTGAAACAAGGAACTAGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAGGAAGCAGAC ATCGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCGGTGATGGCTAGTGACTT
• Tissue: pods
• Gene name: LI_gene_195547;
• Additional information: details;

Expression of Ll_transcript_480132

FPKM

• PAB: 0
• PNAB: 2.4
• PS1: 3.3
• PS2: 0.7
• PS3: 2.3
• PW1: 0.8
• PW2: 0.9
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480132

• Blastp: Probable phospholipid-transporting ATPase 4 from Arabidopsis with 72.59% of identity
• Blastx: Probable phospholipid-transporting ATPase 4 from Arabidopsis with 72.59% of identity
• Eggnog: Phospholipid-transporting atpase(ENOG410XPYK)
• Kegg: Link to kegg annotations (AT1G17500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458066.1)
• Pfam: Phospholipid-translocating ATPase N-terminal (PF16209.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;