Ll_transcript_480115

• Id Trinity: TRINITY_DN52782_c2_g2_i2
• Name Transcript: Ll_transcript_480115
• Sequence: TAGAAATAATATATTACAAAAAGGTAAAAGAAATAAAATATTAAAAAAATGACGGGAGAAAATTAAAGTAGAATGAGTTAGGTGGGACGTGAGATGTGGG AAAAGAAAGGACACAGAAGACACAGTTACACGCTTGCTTCATTCATTCATTCATTCTCTCTCTCTCTCTCTCTATTACTCTCTCCGTCTCTAATTATACC TTCGTCGTTTTCATCTCATAAAACGACACCACTCTCCTTCTGTTTTAGGAAAACAACAAATTGGTAAGGGGGAAAATTTGATTGTTTCTTAGAGGCAAAG ATTGTAGGTTTTTTCCTCTTGGTGGGGTATGTGTCAATATAACTACCTTGAGCTGAAATCCTGCTAAAATGCCGCGGGGGAAGATCAGGGCGAAGCTCAG GAGGAGCCATCTTTACACATTCGGTTGCGTTCGTCCAACCACCATCGATGAGTTGCCTAATCCACTTCACGGTCCTGGATTCTCAAGAACAGTATATTGC AACCAGCCTCTAATCCATGAAAAAAATTCACTATTTTACTGCAGGAATAATGTATCAACTACCAAATACAATGTCATCACATTTTTCCCTCAGGCACTCT TTGAACAATTTCGAAGGGTTGCTAATATATACTTTCTTCTGGCTGCTTGCCTCTCAGTGTCTTCGATTTCGCCATTTAGCCCAATGAGCATGATTGCTCC TTTAGTGTTTGTTGTGGGGCTTAGTATGGCGAAGGAGGGGTTGGAAGATTTTGGCAGATTCCTTCAGGATATCAAAGTTAATGGTCGGAAAGCTAGTATC CATAAAGGTGGTGGTGTTTTTGGTCCCAGGTCATGGGAGAATATTATGGTTGGGGATATCATAAAAGTGGAGAAGGACCAATTTTTCCCATCGGACTTAC TTCTCTTGTCATCAAGTTATGAAGATGGGATATGCTATGTTGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATGTTTGGAGGCTAC CTTATCTCTGGAAAATGATAAAGCTTTTGAGGGTTTCTCAGCAACAATACATTGTGAAGACCCAAATCCGAATCTTTATGCCTTTGTTGGCAACTTTGAG TATGAGAATCAGGTTTATGCTCTTGATCCTAGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAATACTGATTATGTCTATGGGGTGGTCATTTTCCCTG GTCACGATAGCAAAGTCATGCAGAATTCTACAAAATCACCTTCAAAAAGGAGTACAATAGAGAAAAAGATGGATTATATCATATACATTCTTTTCACTGT GCTTATACTGATATCCTTTATTAGCTCAATAGGATTTGTTTTCAAGACCAAGTACCAAGTCACAAAATGGTGGTACTTACGGCCTGACAATATTGAAGAC CAGTATAACCCCAGGAAAATTTTATTGGCTGGGATGAGCCATCTGATTACTGCACTCATTCTTTATGGATATTTGATACCCATCTCTCTCTATGTTTCAA TTGAGATTGTGAAGGTATTACAAGCAACCTTCATCAACAAAGACATTCACATGTATGATGAAGTAACTGGGACTCCAGCCAATGCGCGGACATCAAATTT GAATGAAGAGTTGGGCCAGGTAGACACTATCCTCTCTGATAAAACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAGTGCTCCATTGCTGGTACT GCATATGGTGTGCGTGCTAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGACATTGAGGATCAGGATTCAGATCTCTCTAATTTCCCCATGT CTAAGAGTAACATGCAATCAAAAATGGTTCCAGTAGGTGAAGAAATTGTACTGGAGACTATTGTTACTTCCAAGGTTGATGAGAACCAAAAGCCTCCCAT AAAGGGATTTGGTTTTGAAGACAACCGTCTCATGAATGGTAACTGGTTGAACGAACCCTATGCCAATGTTCTTTTGATGTATTTCCGAATATTAGCAGTT TGCCATACTGCTATCCCTGAGCTAAATGAGGAGATTGACAGTATTGCATACGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTCGCAGCTAGAGAAT TTGGTTTCGAGTTTTATAAAAGAACTCAATCAACCGTTGTAGTACTTGAAAGATTCGCTGCTTCAGGACAAGTGGTTGAAAGAGAGTATAAAATCTTGAA TCTGTTGGATTTTACTAGCAAAAGAAAGCGTATGTCTGTGATTGTGCATGATGAGGAGGGAAGCATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATA TTTGATCGATTGTCAAAGAATGGAAAACAATATTTGGAGGCTACTACTAAACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTT ACAGAAAGCTTGATGAGCAAGAATTCTCTGATTGGAATAATGAGTTTCAGAAAGCTAAGACAGCTGTTGGGCCTGACAGAGAGGCGATGCTTGAGCGGTT ATCAGATATTATCGAAAGAGAGTTGATTCTTGTCGGGGCTACTGCTGTGGAAGATAAACTACAGAAAGGGGTGCCTCAATGCATCGATAAACTTGCCCAA GCTGGTCTAAAGATCTGGGTATTGACAGGGGATAAACTGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTACGACAGGGCATGAAGCAAATCT GTATCACTCTCCCAAATTCAGATTCACTAACCAATGATAGCAAAGAGGTTATTAAAAGCAATATCTTGACTCAAATCACCAATGCCTCACAAATGATAAG ACTGGAAAAGGATCCTCATGCGGCATTTGCATTAATTATTGAAGGGAAAACTCTCACATACGCTTTAGAAGATGATGTCAAGCATCATTTTTTGGGATTG GCTGTGGATTGCGCATCTGTCATTTGCTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTAGTGAAACAAGGAACTAGGAAGACCACTCTAG CAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAGGAAGCAGACATCGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCGGTGATGGCTAGTGA CTTTTCTATCGCCCAATTTCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCGCAAATGATATGCTATTTTTTCTAC AAAAATATAGCATTTGGCCTCACCATATTTTATTTTGAGACCTATGCGGGCTTCTCCGGTCAATCAGTTTATGAAGACTGGTACATGATATTGTTCAATG TTGTTCTTACATCATTGCCGGTCATTTCACTTGGTGTTTTTGAACAAGAT
• Tissue: pods
• Gene name: LI_gene_195547;
• Additional information: details;

Expression of Ll_transcript_480115

FPKM

• PAB: 1.8
• PNAB: 3.6
• PS1: 5.9
• PS2: 2.4
• PS3: 2.3
• PW1: 4.3
• PW2: 3.2
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480115

• Blastp: Phospholipid-transporting ATPase 6 from Arabidopsis with 73.74% of identity
• Blastx: Probable phospholipid-transporting ATPase 4 from Arabidopsis with 73.47% of identity
• Eggnog: Phospholipid-transporting atpase(ENOG410XPYK)
• Kegg: Link to kegg annotations (AT1G54280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458066.1)
• Pfam: Phospholipid-translocating ATPase N-terminal (PF16209.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;