| Id Trinity | TRINITY_DN52782_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_480116 |
| Sequence | GTCACAATCCCACTGTTTCCTTTCAACTTCCATTGTCTTGTTTTGATTCAACAACCTTTTACTATTTCTCTTCCTAACACTCTTTCTTCTTCATTCTCTC TCTCTCTCTCTCTATTACTCTCTCCGTCTCTAATTATACCTTCGTCGTTTTCATCTCATAAAACGACACCACTCTCCTTCTGTGCGTTGCGTTTTTATCT TTCTCCTTCTTTCAATGCCTTTTGCATTCTTCTTCCAAATTGCATCTTTTCATTATTTTTATTCCTTCATTACAATGATTTCTTACCTCATTCTTCATTT CCCTTCCTTTTTAATTTCAATTTTTCAACAAAGGGAATAAAAATATTGCATATTAATTTGATATTAACTTCTGTCAACTTGTTTTCGATTTTTGAGGTGG ACATGCTATTAGTTCAGACATTGCATTAGTTTGTTAATTTTATTTTGTTTAAGCTGTTTTTGTTTTTCTCGTGATTATGTATGTGCGAATAATTTTAATT TAATTCGTCACTTGTTTGAATGATCGTTGTGTAACTCCAATTTGAAGTTTTTTTATGAATAAAAAATTCACGCATGAATGTAGATTTCATTGGTTATGTT GAATTGTACATATTCTGCAGATTTCAAAGTGTGAATGCATTAGATGATGATCGTGTTTATGTTTATATGTACTGTTGTTAACGCTTTCGGTTTGTTTACG CTTTCAGGTTTTAGGAAAACAACAAATTGGTAAGGGGGAAAATTTGATTGTTTCTTAGAGGCAAAGATTGTAGGTTTTTTCCTCTTGGTGGGGTATGTGT CAATATAACTACCTTGAGCTGAAATCCTGCTAAAATGCCGCGGGGGAAGATCAGGGCGAAGCTCAGGAGGAGCCATCTTTACACATTCGGTTGCGTTCGT CCAACCACCATCGATGAGTTGCCTAATCCACTTCACGGTCCTGGATTCTCAAGAACAGTATATTGCAACCAGCCTCTAATCCATGAAAAAAATTCACTAT TTTACTGCAGGAATAATGTATCAACTACCAAATACAATGTCATCACATTTTTCCCTCAGGCACTCTTTGAACAATTTCGAAGGGTTGCTAATATATACTT TCTTCTGGCTGCTTGCCTCTCAGTGTCTTCGATTTCGCCATTTAGCCCAATGAGCATGATTGCTCCTTTAGTGTTTGTTGTGGGGCTTAGTATGGCGAAG GAGGGGTTGGAAGATTTTGGCAGATTCCTTCAGGATATCAAAGTTAATGGTCGGAAAGCTAGTATCCATAAAGGTGGTGGTGTTTTTGGTCCCAGGTCAT GGGAGAATATTATGGTTGGGGATATCATAAAAGTGGAGAAGGACCAATTTTTCCCATCGGACTTACTTCTCTTGTCATCAAGTTATGAAGATGGGATATG CTATGTTGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATGTTTGGAGGCTACCTTATCTCTGGAAAATGATAAAGCTTTTGAGGGT TTCTCAGCAACAATACATTGTGAAGACCCAAATCCGAATCTTTATGCCTTTGTTGGCAACTTTGAGTATGAGAATCAGGTTTATGCTCTTGATCCTAGTC AAATTCTCCTCCGAGATTCAAAGCTTAGGAATACTGATTATGTCTATGGGGTGGTCATTTTCCCTGGTCACGATAGCAAAGTCATGCAGAATTCTACAAA ATCACCTTCAAAAAGGAGTACAATAGAGAAAAAGATGGATTATATCATATACATTCTTTTCACTGTGCTTATACTGATATCCTTTATTAGCTCAATAGGA TTTGTTTTCAAGACCAAGTACCAAGTCACAAAATGGTGGTACTTACGGCCTGACAATATTGAAGACCAGTATAACCCCAGGAAAATTTTATTGGCTGGGA TGAGCCATCTGATTACTGCACTCATTCTTTATGGATATTTGATACCCATCTCTCTCTATGTTTCAATTGAGATTGTGAAGGTATTACAAGCAACCTTCAT CAACAAAGACATTCACATGTATGATGAAGTAACTGGGACTCCAGCCAATGCGCGGACATCAAATTTGAATGAAGAGTTGGGCCAGGTAGACACTATCCTC TCTGATAAAACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAGTGCTCCATTGCTGGTACTGCATATGGTGTGCGTGCTAGTGAAGTTGAACTTG CTGCAGCAAAGCAGATGGCTTCTGACATTGAGGATCAGGATTCAGATCTCTCTAATTTCCCCATGTCTAAGAGTAACATGCAATCAAAAATGGTTCCAGT AGGTGAAGAAATTGTACTGGAGACTATTGTTACTTCCAAGGTTGATGAGAACCAAAAGCCTCCCATAAAGGGATTTGGTTTTGAAGACAACCGTCTCATG AATGGTAACTGGTTGAACGAACCCTATGCCAATGTTCTTTTGATGTATTTCCGAATATTAGCAGTTTGCCATACTGCTATCCCTGAGCTAAATGAGGAGA TTGACAGTATTGCATACGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTCGCAGCTAGAGAATTTGGTTTCGAGTTTTATAAAAGAACTCAATCAAC CGTTGTAGTACTTGAAAGATTCGCTGCTTCAGGACAAGTGGTTGAAAGAGAGTATAAAATCTTGAATCTGTTGGATTTTACTAGCAAAAGAAAGCGTATG TCTGTGATTGTGCATGATGAGGAGGGAAGCATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAACAATATT TGGAGGCTACTACTAAACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTACAGAAAGCTTGATGAGCAAGAATTCTCTGATTG GAATAATGAGTTTCAGAAAGCTAAGACAGCTGTTGGGCCTGACAGAGAGGCGATGCTTGAGCGGTTATCAGATATTATCGAAAGAGAGTTGATTCTTGTC GGGGCTACTGCTGTGGAAGATAAACTACAGAAAGGGGTGCCTCAATGCATCGATAAACTTGCCCAAGCTGGTCTAAAGATCTGGGTATTGACAGGGGATA AACTGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTACGACAGGGCATGAAGCAAATCTGTATCACTCTCCCAAATTCAGATTCACTAACCAA TGATAGCAAAGAGGTTATTAAAAGCAATATCTTGACTCAAATCACCAATGCCTCACAAATGATAAGACTGGAAAAGGATCCTCATGCGGCATTTGCATTA ATTATTGAAGGGAAAACTCTCACATACGCTTTAGAAGATGATGTCAAGCATCATTTTTTGGGATTGGCTGTGGATTGCGCATCTGTCATTTGCTGTCGTG TGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTAGTGAAACAAGGAACTAGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGAT TCAGGAAGCAGACATCGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCGGTGATGGCTAGTGACTTTTCTATCGCCCAATTTCGGTTTTTGGAGCGG CTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCGCAAATGATATGCTATTTTTTCTACAAAAATATAGCATTTGGCCTCACCATATTTTATT TTGAGACCTATGCGGGCTTCTCCGGTCAATCAGTTTATGAAGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCGGTCATTTCACTTGG TGTTTTTGAACAAGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_195547; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_480116
| Blastp | Phospholipid-transporting ATPase 6 from Arabidopsis with 73.74% of identity |
|---|---|
| Blastx | Probable phospholipid-transporting ATPase 4 from Arabidopsis with 73.47% of identity |
| Eggnog | Phospholipid-transporting atpase(ENOG410XPYK) |
| Kegg | Link to kegg annotations (AT1G54280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458066.1) |
| Pfam | Phospholipid-translocating ATPase N-terminal (PF16209.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |