Ll_transcript_480117

• Id Trinity: TRINITY_DN52782_c2_g2_i4
• Name Transcript: Ll_transcript_480117
• Sequence: CTTATCCATATAAATTTGGTATATTAATTTCTTCCTAGCTGTTTTGGATTCTTGAGATGCTTAGTATAGAGATTGCATTAGTTACTAAATTTAATTTCTT ACTGTGATATTAAATTTTTAAGCTTTTTTGTTTCCCCTTTATTTTTTATGGATGTGTGGTAATTTGACTTCAATTCAATTCTTGTTTGAATGGTGGGCTC TGTATGTAGTTCAATTCAATTCATGAATTTTGATTTCCTTGTTTATATTGAATTGCACATATTCTGCAGATTCTGTAGTGTGAATGCATCAAATAATGAT CATGTTTCTAGTTACACTAATGGGTTGAAATTTTTTATTTAAATCAAAGTTTAATAAATACGTATTTTACTAACCAAACAGAACAATAAGTGACACATGG AGTGATAGATTTATCTGGTATGTGTTGTCTTATATGTTCTATAGTTAATGCTTTCCTTTTATGTTTATGTTATCAGGTTTTTGGAAAACAATATATTGGT GATAAGGGAGGAGTTTGATCAATTCTTAGAGGTATGTGTGAATTGTCAAATTTAACAACCTTGAACTGAAATCTTACTGAAATGACACGAGGGAGGATCA GGGCGAAGCTCCGGAGGAGCCATCTTTACACGTTTGGTTGCATTCGCCCAACCACCATTGATGAGTTGCCTAATCCACTTAATGGCCCAGGGTTCTCAAG AACAGTTTATTGCAACCAGCCTCAAATCCATGACAAGAAATCTCTATTTTACTGCAGTAATAATGTGTCAACTACTAAATACAATGTTATCACATTTTTT CCAAAGGCACTCTTTGAACAATTTCGAAGGGTTGCTAATATATACTTCCTTCTGGCTGCGTGCCTATCAGCCTCTTCGATTTCACCATTTAGCCCATTGA GCATGATTGCTCCTTTGGTGTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGGGTTGGAAGATTCTCGCAGGTTCCTTCAGGATGTCAAAGTTAATCACCG GAAAGCTAGCATCCATAAAGGCGATGGCGTTTTTGGTCCCAGGTCATGGCAGAATATTATGGTTGGGGATATCATAAAAGTGGAGAAGGACCAATTTTTT CCATCAGACTTACTTCTCTTGTCATCAAGTTATTACGAGGATGGGATATGCTACGTGGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAA GATGTTTGGAGGCTACATTGTCTCTAGATAATGATGAGGCTTTTAATGGTTTCTCAGGAACATTACATTGTGAAGACCCAAATCCGAACCTTTATACTTT TGTTGGAAACTTTGAGTATGAGCATCAGGTTTATTCTATTGACCCCAATCAAATTCTCCTCCGAGATTCAAAGCTTAGGAATACTGATTATGTCTATGGG GTGGTCATTTTCACTGGTCACGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGGAGTACAATAGAGAAAAAGATGGATTATATCATAT ACGCTCTTTTCACTGTGCTTATATTAATATCCTTTATTAGTTCAATAGGATTTGTTGTGAAGACCAAGTATCAAGTCACAAAATGGTGGTACTTACGACC TGACGACATTGAAGACCAGTATAACCCAAGGAAAATTGAATTGGCTGGGATGAGCCATCTGATTACTGCTCTCATTCTTTATGGATATTTGATACCTATC TCGCTTTATGTTTCAATTGAGATTGTGAAGGTATTACAAGCAACCTTCATTAACAAAGATATTCACATGTATGATGAAGTAACTGGGACTAGAGCTGATG CACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACTATCCTCTCTGATAAAACTGGCACTTTAACCTGCAATCAGATGGATTTCTTGAAGTG TTCCATTGCTGGTACTGCATATGGTGTGCGTGCTAGTGAAGTTGAAGTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGAGGACGAGGATTCAGATCTC TCCAATTTCCCCATGCCCAAGACTAAAGTTTCATGGGAAGATGTTAGAAGAGCTGAAGAAATTGAACTTGAGTCTGTTGTTACTTCCAATAGTGATGAGG ATCATAGGGCCACCATAAAAGGATTTGGTTTCGAAGACAACCGTCTCATGAATGGTAACTGGTTGAAAGAGCCCAATGCTGATGTTCTTTTGATGTTTTT CCGAGTGTTAGCAG
• Tissue: pods
• Gene name: LI_gene_195547;
• Additional information: details;

Expression of Ll_transcript_480117

FPKM

• PAB: 0.5
• PNAB: 0
• PS1: 0.1
• PS2: 0.7
• PS3: 0.2
• PW1: 0.4
• PW2: 0.9
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480117

• Blastp: Probable phospholipid-transporting ATPase 7 from Arabidopsis with 68.15% of identity
• Blastx: Probable phospholipid-transporting ATPase 4 from Arabidopsis with 68.62% of identity
• Eggnog: Phospholipid-transporting atpase(ENOG410XPYK)
• Kegg: Link to kegg annotations (AT3G13900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448233.1)
• Pfam: Phospholipid-translocating ATPase N-terminal (PF16209.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;