Ll_transcript_480119

• Id Trinity: TRINITY_DN52782_c2_g2_i6
• Name Transcript: Ll_transcript_480119
• Sequence: TAGAAATAATATATTACAAAAAGGTAAAAGAAATAAAATATTAAAAAAATGACGGGAGAAAATTAAAGTAGAATGAGTTAGGTGGGACGTGAGATGTGGG AAAAGAAAGGACACAGAAGACACAGTTACACGCTTGCTTCATTCATTCATTCATTCTCTCTCTCTCTCTCTCTATTACTCTCTCCGTCTCTAATTATACC TTCGTCGTTTTCATCTCATAAAACGACACCACTCTCCTTCTGTTTTAGGAAAACAACAAATTGGTAAGGGGGAAAATTTGATTGTTTCTTAGAGGCAAAG ATTGTAGGTTTTTTCCTCTTGGTGGGGTATGTGTCAATATAACTACCTTGAGCTGAAATCCTGCTAAAATGCCGCGGGGGAAGATCAGGGCGAAGCTCAG GAGGAGCCATCTTTACACATTCGGTTGCGTTCGTCCAACCACCATCGATGAGTTGCCTAATCCACTTCACGGTCCTGGATTCTCAAGAACAGTATATTGC AACCAGCCTCTAATCCATGAAAAAAATTCACTATTTTACTGCAGGAATAATGTATCAACTACCAAATACAATGTCATCACATTTTTCCCTCAGGCACTCT TTGAACAATTTCGAAGGGTTGCTAATATATACTTTCTTCTGGCTGCTTGCCTCTCAGTGTCTTCGATTTCGCCATTTAGCCCAATGAGCATGATTGCTCC TTTAGTGTTTGTTGTGGGGCTTAGTATGGCGAAGGAGGGGTTGGAAGATTTTGGCAGATTCCTTCAGGATATCAAAGTTAATGGTCGGAAAGCTAGTATC CATAAAGGTGGTGGTGTTTTTGGTCCCAGGTCATGGGAGAATATTATGGTTGGGGATATCATAAAAGTGGAGAAGGACCAATTTTTCCCATCGGACTTAC TTCTCTTGTCATCAAGTTATGAAGATGGGATATGCTATGTTGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATGTTTGGAGGCTAC CTTATCTCTGGAAAATGATAAAGCTTTTGAGGGTTTCTCAGCAACAATACATTGTGAAGACCCAAATCCGAATCTTTATGCCTTTGTTGGCAACTTTGAG TATGAGAATCAGGTTTATGCTCTTGATCCTAGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAATACTGATTATGTCTATGGGGTGGTCATTTTCCCTG GTCACGATAGCAAAGTCATGCAGAATTCTACAAAATCACCTTCAAAAAGGAGTACAATAGAGAAAAAGATGGATTATATCATATACATTCTTTTCACTGT GCTTATACTGATATCCTTTATTAGCTCAATAGGATTTGTTTTCAAGACCAAGTACCAAGTCACAAAATGGTGGTACTTACGGCCTGACAATATTGAAGAC CAGTATAACCCCAGGAAAATTTTATTGGCTGGGATGAGCCATCTGATTACTGCACTCATTCTTTATGGATATTTGATACCCATCTCTCTCTATGTTTCAA TTGAGATTGTGAAGGTATTACAAGCAACCTTCATCAACAAAGACATTCACATGTATGATGAAGTAACTGGGACTCCAGCCAATGCGCGGACATCAAATTT GAATGAAGAGTTGGGCCAGGTAGACACTATCCTCTCTGATAAAACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAGTGCTCCATTGCTGGTACT GCATATGGTGTGCGTGCTAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGACATTGAGGATCAGGATTCAGATCTCTCTAATTTCCCCATGT CTAAGAGTAACATGCAATCAAAAATGGTTCCAGTAGGTGAAGAAATTGTACTGGAGACTATTGTTACTTCCAAGGTTGATGAGAACCAAAAGCCTCCCAT AAAGGGATTTGGTTTTGAAGACAACCGTCTCATGAATGGTAACTGGTTGAACGAACCCTATGCCAATGTTCTTTTGATGTATTTCCGAATATTAGCAGTT TGCCATACTGCTATCCCTGAGCTAAATGAGGAGATTGACAGTATTGCATACGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTCGCAGCTAGAGAAT TTGGTTTCGAGTTTTATAAAAGAACTCAATCAACCGTTGTAGTACTTGAAAGATTCGCTGCTTCAGGACAAGTGGTTGAAAGAGAGTATAAAATCTTGAA TCTGTTGGATTTTACTAGCAAAAGAAAGCGTATGTCTGTGATTGTGCATGATGAGGAGGGAAGCATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATA TTTGATCGATTGTCAAAGAATGGAAAACAATATTTGGAGGCTACTACTAAACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTT ACAGAAAGCTTGATGAGCAAGAATTCTCTGATTGGAATAATGAGTTTCAGAAAGCTAAGACAGCTGTTGGGCCTGACAGAGAGGCGATGCTTGAGCGGTT ATCAGATATTATCGAAAGAGAGTTGATTCTTGTCGGGGCTACTGCTGTGGAAGATAAACTACAGAAAGGGGTGCCTCAATGCATCGATAAACTTGCCCAA GCTGGTCTAAAGATCTGGGTATTGACAGGGGATAAACTGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTACGACAGGGCATGAAGCAAATCT GTATCACTCTCCCAAATTCAGATTCACTAACCAATGATAGCAAAGAGGTTATTAAAAGCAATATCTTGACTCAAATCACCAATGCCTCACAAATGATAAG ACTGGAAAAGGATCCTCATGCGGCATTTGCATTAATTATTGAAGGGAAAACTCTCACATACGCTTTAGAAGATGATGTCAAGCATCATTTTTTGGGATTG GCTGTGGATTGCGCATCTGTCATTTGCTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTAGTGAAACAAGGAACTAGGAAGACCACTCTAG CAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAGGAAGCAGACATCGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCGGTGATGGCTAGTGA CTTTTCTATCGCCCAATTTCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCGCAAATGGTAATCAGTTAATCTTCA TCTTTAATCTTGATCATTATTCTCAGAAATTGGACGTCTTCATGATCTTGTCTACTGAGCACATCCTGTGCATGGATAGGAAAGCATGTAACACGTTTAG CATTTTATTTCTTTTTTTCTCTTCTGAACCAATCCATTATGCTTGTCAGATATGCTATTTTTTCTACAAAAATATAGCATTTGGCCTCACCATATTTTAT TTTGAGACCTATGCGGGCTTCTCCGGTCAATCAGTTTATGAAGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCGGTCATTTCACTTG GTGTTTTTGAACAAGAT
• Tissue: pods
• Gene name: LI_gene_195547;
• Additional information: details;

Expression of Ll_transcript_480119

FPKM

• PAB: 0.7
• PNAB: 0.7
• PS1: 0.9
• PS2: 0.4
• PS3: 0.7
• PW1: 0.6
• PW2: 0.9
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480119

• Blastp: Phospholipid-transporting ATPase 6 from Arabidopsis with 73.16% of identity
• Blastx: Probable phospholipid-transporting ATPase 4 from Arabidopsis with 72.77% of identity
• Eggnog: Phospholipid-transporting atpase(ENOG410XPYK)
• Kegg: Link to kegg annotations (AT1G54280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458066.1)
• Pfam: Phospholipid-translocating ATPase N-terminal (PF16209.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;