Ll_transcript_481776

Id TrinityTRINITY_DN52788_c2_g1_i4
Name TranscriptLl_transcript_481776
SequenceCTTTTATTTCTCAGTTCTCCTCAGAGGTAGCGATCTTTTTATTTTATTAAGAAAAGAAAAAAGGGCCAAATTAACTTCTCTCTATTCCTCTCAACCCTAA CCCTAATCACAATCGCAATTCATAATTCATAATACTCATTCCATTGATTCCCAACACACTCGTAACATCATTCGGTTCTGATTCCGAAACCCTAACGCTA TGGACTCACAACAGAGCAATCTATTCGACACCGCTTCGCAACCCGACGCTGCCAACGACGCCTACACTTTCCTTGAATTCAACACTCAGGGCGATGATTT CGACTACCCGGAGTTCCACGACCCGATTAGGTCACCGGTGTCATGGCCCACGCCCTCCGATTCGCTGGCTGAACCCTCTGAGCGCGGTGGTGGAGGTAAT GGAGCTGGGTCTGATCACCAGTCTGATGCTTCGCCTGTTTCTGCAACTCCGGGGAGCGCGACCAAGGGGCGTTCTGGAAGCAGCGCCGGAGGGAATAGCC AGATGGTGGATGCGCTGGTTCCGGGGATGAGCGAGTTGAATTTTGAGGACACGGGTGATGATGATAATTTTGAGTATGGTAAGGGAGATTTCACTGAACA TGCTTGTAAGTATTGTGGTGTCTCAAATCCAGCGTGTGTTGTGAGGTGCAACGTGCCTTCGTGTCGCAAATGGTTCTGTAATTCACGTGGGAACACTTCT GGATCGCATATTGTAAATCATTTGGTTCGGGCAAAACATAAAGAAGTCTGTCTACACAAAGATAGTCCATTGGGAGAAACAATTCTTGAATGCTACAACT GTGGCTGTCGTAATGTGTTTCTTCTTGGATTTATTTCTGCCAAGACTGAAAGTGTAGTTGTTCTTCTTTGTCGCGAGCCTTGCTTAAGTGTCAATGCATT GAAGGACATGAATTGGGACCTTAGTCAATGGTGTCCCTTGATTGACGATAGGTGCTTCTTGCAGTGGCTCGTCAAGGTTCCATCCGAACAAGAGCAGTTA AGGGCACGCCAAATAAGTGCGCAGCAAATAAATAAGGTGGAAGAGTTGTGGAAGACAAACCCCGATGCTTCTTTTGAGGACCTTGAGAAGCCTGGTGTAG ATGATGAACCTCAATCTGTGGCTTTGAAATATGAAGATGCTTATCAGTATCAAAATGTATTCGCACCTCTTATTAAGCTTGAAGCCGATTATGATAAGAT GATGAAAGAATCACAAAGCAAGGACAATCTTACTGTTCGATGGGATATCGGTCTTAATAAGAAGCGTGTTGCATACTTTGTTTTTCCAAAGGAAGACAAT GAGTTGCGTCTTGTACCTGGAGATGAATTACGATTACGTTATTCTGGTGATGCTGCACACCCTGCGTGGCAGTCAGTGGGTCATGTGATTAAGCTAACTG CACAGGAAGAAGTAGCACTGGAGCTTCGTGCCAGTCAGGGGGTGCCAGTTGATGTAAACCATGGTTTCAGTGTTGATTTTGTTTGGAAGAGTACAAGCTT TGATAGGATGCAAGGTGCGATGAAAAACTTTGCTGTGGATGAGACAAGTGTAAGCGGGTATATTTATCATCATTTATTGGGTCACGAAGTTGAGGTTCAG ATGGTGCGTAATGCATTGCCTCGTCGCTTTGGTGCACCCGGGCTTCCAGAACTCAATGCATCTCAAGTTTTTGCTGTTAAAAGTGTTCTCCAGAGGCCTA TTAGTTTGATTCAAGGTCCACCTGGAACTGGGAAGACTGTAACTTCTGCAGCACTTGTATATCACATGGCCAAGCAAGGACAGGGACAGGTTTTGGTTTG TGCACCTAGTAATGTGGCTGTGGACCAGCTGGCTGAAAAGATAAGTGCAACTGGGTTGAAGGTTGTGAGGCTCTGTGCAAAGTCAAGGGAAGCTGTGAGT TCTCCTGTTGAGCATTTAACACTTCACTATCAGGTTCGACATCTGGACACATCTGACAAGAGTGAGCTTCACAAATTACAAATGCTTAAAGATGAACAAG GAGAACTTTCTAGCAGTGATGAAAAAAAATATAAAGCACTTAAACGAGCAACAGAGAGGGAGATTTCTCAAAGTGCTGATGTGATATGCTGTACATGTGT TGGTGCTGGAGATCCTCGGCTATCAAATTTTAGGTTCCGTCAGGTACTTATTGACGAGTCCACTCAAGCAACAGAACCTGAATGTCTCATTCCTTTGGTT CTTGGGGCAAAGCAGGCTGTTCTTGTGGGTGACCATTGTCAGCTTGGTCCAGTCATTATGTGCAAGAAAGCAGCTCGCGCTGGGCTAGCTCAGTCACTTT TTGAACGTCTTGTTCTACTTGGCGTCAAACCAATTAGGTTGCAGGTTCAGTACCGTATGCATCCATGTCTTTCAGAATTTCCCTCAAATAGCTTTTATGA AGGCACCTTGCAAAATGGAGTCACTGTTAATGAAAGGCAAACATCAGGAATTGATTTTCCATGGCCTGTGCCAAACCGTCCCATGTTCTTTTATGTTCAG ATGGGACAAGAAGAGATAAGTGCAAGTGGAACATCTTATTTAAATAGGACCGAGGCTGCAAATGTTGAAAAGATTGTAACCACTTTCTTAAAAAGTGGCG TGGTCCCGAGTCAGATCGGTGTGATAACACCTTATGAGGGGCAAAGAGCTTATATTGTGAACTATATGTCAAGAAATGGTTCTCTCAGACAGCAACTTTA TAAGGAGATTGAGGTTTTGATGCAGATACTATCATGATTTATATTCTCTCTCTCTGAATTTGCCATATAGGTGATGCAGTAATTTTATCTTTTTCAGGTT GCCAGTGTTGATTCCTTTCAGGGGAGGGAGAAAGACTACATCATTCTTTCATGTGTTAGAAGTAATGAACACCAGGGCATCGGGTTTCTGAATGATCCGA GGAGGCTCAATGTTGCTTTGACTCGAGCGAGATATGGTATCGTTATTCTGGGAAACCCTAAAGTTCTAAGCAAGCAACCCCTGTGGAATGGCTTATTGAC ACACTATAAGGAACATGAATGCTTAGTAGAAGGGCCTTTGAACAATTTGAAGCAGAGCATGGTTCAATTCCAGAAACCCAAAAAAATTTACAACGAACGG AGGCTTTTTTATGGGGGTGGACCTGGAATTGCAGCTAATGACAATTTTGGTTCTGGTGCAACTTCAGATCGAAGGATTGGCCGAGGAAGAGGATCTTATA TACCTCCTGGCCCAACAAATGGAACCCATAAGCCTGGTGTGCATTCTGCTGGGTATACTCTGCCTAGAGCTCCCTTGCATCCTTTTCATGGTGGCCCCCA ATCTCAACCATATGCAATTCCATCTCGTAGAGCTGTACATGGACCCGTTGGGGCAGTTCCTCATGTACCGTCTCCAGGGAGTCGAGGTTTTGGGGCTGGC AGAGGTAATACCGGTGCTTCAATTGGCAACCATCTTCCGCACCAGCAAAGTACACAGCAACCTGTTGGGAATATTGGATCCACATTTAACTTCCCTGCTT TGGAAAATCCTAATAGCCAGCCATCTGTTGGCGGTCCATTTTCTCAACCTGGATTTGCTAATAATATGCCAGTCCAAGGGGCAAGCCAATCATTTCGTGA TCAGTTTTCTGTGCCTGGAATGTCTCAGGACTTCTTGGGTGATGACTTCAAAAGCCAGGGATCTCTTGTTCCGTATAACGTTGCTGATTTCTCTACACAG GCTTCTCAATCTGCATATGCTGTTGATTATGCTACACAAGGAGCACAAGGTGGATTCCCGGGGAATTTCCTGAACCAGAATTCTCAAGCTGGGTATCCGC GTTTTGGTTCTGGAAATGACTTCATGTCTCAGGACTACATGGCCCATGGATCACCAGATCTTTTCACTCAGGCTGGATTCAGTGATCACTTACAAGATGA TGCAACACAGAGCCATTTCAGTGTGGCCAATCCCAATGCTCTTCAGTCTCAGATGAATTCTCTCTATTCCCAGCCTTTTGCTCACTACAACACACAACCG CCGAACTTGCAGGCTTCCCAACAGCAGTCTCAGGGTCAGGGCTCTCAAAATCAGAAAATTCACTATAATGGTTAAGGAACTTTAAGAGCTTAATATGGCT TTGATGGGTTTTTTGTTGTTGCAATCAGCAAACTGGGTTTGTTCCTGTCTTCTTTGCGATGGCTTTCTTGGGATCTCTGTCTGCATAACCCATATTTGAT GGATTGGTATTATATGATTTGATTTGGTGGAATTGTGGGGCATTAAGAAGGATACAAGCTGCTCATCTTGGGCAAGAAAAAGAAGGATAACCCGTTACCT TACTGAAATTTTTTAAGGTGAAATTATTCGAGCTAGCATTACATGGAATGGTTTTGTCAAAAGGGTCTCTCTATCTTGAAGCATAAGGGACGG BLAST
Tissuepods
Gene nameLI_gene_195592; 
Additional informationdetails; 

Expression of Ll_transcript_481776

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_481776
BlastpRegulator of nonsense transcripts 1 homolog from Arabidopsis with 87.16% of identity
BlastxRegulator of nonsense transcripts 1 homolog from Arabidopsis with 80.67% of identity
EggnogHelicase(COG1112)
KeggLink to kegg annotations (AT5G47010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019423136.1)
PfamRNA helicase (UPF2 interacting domain) (PF09416.9)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;