Ll_transcript_481783

Id TrinityTRINITY_DN52788_c2_g1_i9
Name TranscriptLl_transcript_481783
SequenceCTTTTATTTCTCAGTTCTCCTCAGAGGTAGCGATCTTTTTATTTTATTAAGAAAAGAAAAAAGGGCCAAATTAACTTCTCTCTATTCCTCTCAACCCTAA CCCTAATCACAATCGCAATTCATAATTCATAATACTCATTCCATTGATTCCCAACACACTCGTAACATCATTCGGTTCTGATTCCGAAACCCTAACGCTA TGGACTCACAACAGAGCAATCTATTCGACACCGCTTCGCAACCCGACGCTGCCAACGACGCCTACACTTTCCTTGAATTCAACACTCAGGGCGATGATTT CGACTACCCGGAGTTCCACGACCCGATTAGGTCACCGGTGTCATGGCCCACGCCCTCCGATTCGCTGGCTGAACCCTCTGAGCGCGGTGGTGGAGGTAAT GGAGCTGGGTCTGATCACCAGTCTGATGCTTCGCCTGTTTCTGCAACTCCGGGGAGCGCGACCAAGGGGCGTTCTGGAAGCAGCGCCGGAGGGAATAGCC AGATGGTGGATGCGCTGGTTCCGGGGATGAGCGAGTTGAATTTTGAGGACACGGGTGATGATGATAATTTTGAGTATGGTAAGGGAGATTTCACTGAACA TGCTTGTAAGTATTGTGGTGTCTCAAATCCAGCGTGTGTTGTGAGGTGCAACGTGCCTTCGTGTCGCAAATGGTTCTGTAATTCACGTGGGAACACTTCT GGATCGCATATTGTAAATCATTTGGTTCGGGCAAAACATAAAGAAGTCTGTCTACACAAAGATAGTCCATTGGGAGAAACAATTCTTGAATGCTACAACT GTGGCTGTCGTAATGTGTTTCTTCTTGGATTTATTTCTGCCAAGACTGAAAGTGTAGTTGTTCTTCTTTGTCGCGAGCCTTGCTTAAGTGTCAATGCATT GAAGGACATGAATTGGGACCTTAGTCAATGGTGTCCCTTGATTGACGATAGGTGCTTCTTGCAGTGGCTCGTCAAGGTTCCATCCGAACAAGAGCAGTTA AGGGCACGCCAAATAAGTGCGCAGCAAATAAATAAGGTGGAAGAGTTGTGGAAGACAAACCCCGATGCTTCTTTTGAGGACCTTGAGAAGCCTGGTGTAG ATGATGAACCTCAATCTGTGGCTTTGAAATATGAAGATGCTTATCAGTATCAAAATGTATTCGCACCTCTTATTAAGCTTGAAGCCGATTATGATAAGAT GATGAAAGAATCACAAAGCAAGGACAATCTTACTGTTCGATGGGATATCGGTCTTAATAAGAAGCGTGTTGCATACTTTGTTTTTCCAAAGGAAGACAAT GAGTTGCGTCTTGTACCTGGAGATGAATTACGATTACGTTATTCTGGTGATGCTGCACACCCTGCGTGGCAGTCAGTGGGTCATGTGATTAAGCTAACTG CACAGGAAGAAGTAGCACTGGAGCTTCGTGCCAGTCAGGGGGTGCCAGTTGATGTAAACCATGGTTTCAGTGTTGATTTTGTTTGGAAGAGTACAAGCTT TGATAGGATGCAAGGTGCGATGAAAAACTTTGCTGTGGATGAGACAAGTGTAAGCGGGTATATTTATCATCATTTATTGGGTCACGAAGTTGAGGTTCAG ATGGTGCGTAATGCATTGCCTCGTCGCTTTGGTGCACCCGGGCTTCCAGAACTCAATGCATCTCAAGTTTTTGCTGTTAAAAGTGTTCTCCAGAGGCCTA TTAGTTTGATTCAAGGTCCACCTGGAACTGGGAAGACTGTAACTTCTGCAGCACTTGTATATCACATGGCCAAGCAAGGACAGGGACAGGTTTTGGTTTG TGCACCTAGTAATGTGGCTGTGGACCAACTGGCTGAAAAGATAAGTGCTACTGGATTGAAGGTTGTGAGGCTCTGTGCAAAGTCAAGGGAAGCTGTGAGT TCTCCTGTTGAGCATTTAACGCTTCACTATCAGGTTCGACATCTTGATACATCTGACAAGAGTGAACTTCATAAGTTACAAATGCTTAAAGATGAACAAG GAGAACTTTCTAGCAGTGATGAAAAAAAATATAAAGCACTTAAGCGAGCAACAGAGAGGGAGATTTCTCAAAGTGCTGATGTGATATGCTGTACATGTGT CGGTGCTGGAGATCCTCGGCTAGCAAATTTTAGGTTCCGTCAGGTACTTATCGACGAGTCCACTCAAGCAACAGAGCCTGAATGTCTCATTCCTCTGGTT CTTGGGGTGAAGCAGGTTGTTCTCGTGGGTGATCATTGTCAGCTTGGTCCAGTCATTATGTGCAAGAAAGCAGCTCGGGCTGGGCTAGCTCAGTCACTTT TTGAACGCCTTGTTATACTTGGCGTCAAGCCAATTAGGTTGCAGGTCCAGTACCGTATGCATCCATGCCTTTCAGAATTTCCCTCTAATAGCTTTTATGA AGGCACCCTGCAAAATGGAGTCACTGTTAATGAAAGGCAGACAACAGGAATTGATTTTCCATGGCCTGTGCCAAACCGTCCCATGTTCTTTTATGTTCAG ATGGGACAAGAAGAGATAAGTGCAAGTGGAACATCTTATTTAAATAGGACTGAGGCTGCAAATGTTGAAAAGATTGTTACCACTTTCTTAAAAAGTGGTG TTGTCCCAAGTCAGGTACCTTTTGAATTGTAGATCGAACACTGGGGCTACACCAATACTGTTAATATTACATTATGGTTAATTGGTTATTACTATTTTTA TTTTACAATTTTCAGATTGGTGTTATAACACCGTATGAGGGGCAAAGAGCTTATATCGTGAACTATATGTCAAGAAATGGTTCTCTCAGGCAACAACTTT ACAAGGAGATTGAGGTTGCTAGTGTTGATTCCTTCCAAGGAAGGGAGAAAGACTACATCATTCTTTCATGTGTTAGAAGTAATGAACATCAGGGCATTGG ATTTCTGAACGATCCGAGAAGGC BLAST
Tissuepods
Gene nameLI_gene_195592; 
Additional informationdetails; 

Expression of Ll_transcript_481783

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_481783

BlastpRegulator of nonsense transcripts 1 homolog from Arabidopsis with 86.39% of identity
BlastxRegulator of nonsense transcripts 1 homolog from Arabidopsis with 86.24% of identity
EggnogHelicase(COG1112)
KeggLink to kegg annotations (AT5G47010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421384.1)
PfamRNA helicase (UPF2 interacting domain) (PF09416.9)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;