Ll_transcript_479812

Id TrinityTRINITY_DN52792_c5_g4_i1
Name TranscriptLl_transcript_479812
SequenceCGAAAAGTAAACCATTATGAAATAAATTCCATTCAAACAAAATAAGATAAATGCAAGAAGTAGTTGATGATACTCCAAAGACACATGAATCGTTCTATGG TTGCCACGTGGAGGGTAATGTCTGTTGCACACTTGCACGTTTACAAACAACAACACTAGAAAATATAGAATAACAATTATTCCTTTTTAAATCCTTGACC ATTGTGGTCATTATTGTGGCTCAGTTCAACTTCAAGAGTCAACACACTGTAACTACCTCTCTGTCAAACTCTCTCTGCTTCACTGTCTGAATAAGTATCA AATATGGCAATGGTTACTGCTTCATGCAACTTAGTCTCCAGAAGTTCTCAACTCCACCATGCACCAACTATCTCATATGAATCAAAACCTGCACCAATGG GACTTAGATTTCTAAAGCAGACAAATACTCATAATGGACTTAGGATTTTGAACTCGGTGGATGAGCTTCTAAACAGAATCCCAAAAAAAGTTAATGCAGC ACAAGCTAGGAAGAAAGGACTTCAAAGCAAGAATGTTAGGCCTAAAGGTACCATCATATGTGGCATGAATTTGATATTTGTAGGAACTGAGGTTGGTCCA TGGAGCAAAACCGGAGGGTTAGGAGATGTTCTTGGAGGTCTGCCACCAGTTTTGGCAGGTAATGGGCATCGAGTTATGACAATATCTCCGCGTTATGATC AGTACAAAGATGCATGGGATACAAGTGTTACAGTTGAGGTAAAAGTAGGAAATAGAACAGAAAAAGTTGGCTTCTTCCATTGCTATAAAAGAGGAGTTGA TCGCGTCTTTGTGGATCATCCACTATTCCTTGAAAAGGTCTGGGGGAAAAGTGGGACCAAACTTTATGGACCTTCTGCTGGAGATGATTACGAAGATAAT CAACTACGTTTCAGCCTGTTCTGTCAGGCAGCTTTGCTTGCACCAAGGGTTCTGAATCTTAAGGAAAGTAAATATTTCTCAGGACCATATGGCGAAGATG TTATTTTCATTGCCAATGATTGGCACACTGCTCTTCTCCCATGCTATTTGAAAACTTTGTACCAACCATTGGGCATCTTTAAGAATGCTCGAGTTGTATT TTGTATCCACAACATTGCTTACCAAGGAAGATTTCCATTCGCTGACTTTTCACTTCTCAATCTCCCAGACCAATTTAAAAGTTCCTTTGATTTCATTGAT GGGCATGTTAAACCGGTGATTGGAAGGAAAATCAATTGGATGAAAGCTGGAATTGTGGAATCACACCAAGTGTTAACTGTCAGTCCATACTATGCTGAAG AACTAGTGTCAGGCCCGGATAAAGGGGTTGAGTTGGACAACATTCTTCGCAAAACTGGTATTATTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAA TCCATCAACTGATAAATACATAACTGTCAAATACACTGCTACAACTGTATTGGAAGGAAAGGCTCTTTTGAAAGAAGCCCTCCAAGCCGAAGTTGGATTG CCGGTAGACAGAAAAATTCCTCTCATTGGTTTCATCGGTAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGAAGCCATTCCTCAATTTATCAATG ATGATGTTCAGATAGTAGCCCTTGGAACAGGAAAAAAACAAATGGAAAAGCAGCTTCAACAGCTTGAAGTAGCATACCCTGACAAGGCCAGAGGAGTGGC AAAATTCAATGTTCCCCTAGCACATATGATAATTGCTGGAGCTGATTTTATATTGATTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCT ATGCGCTATGGAACCGTACCACTTGTTGCCTCAACTGGTGGACTAGTCGACACAGTTAAAGAAGGTTTCACTGGATTTCAGATGGGTGCCTTCAATGTCG AATGTGAAACTGTGGATCCAGCTGATGTGGATGCTTTGGCTAAGACTGTCAAAAGGGCTCTTGTAGTTCATGGAACTCCAGCTTTTACAGAAATAATCCA GAATTGCATGGCTCAAGATCTTTCATGGAAGGAACCTGCTAAGAAGTGGGAGGAAGTGCTTCTAAGGTTGGGAGTTCCTGGTAGTGAAGCTGGAATTGAT GGTGAAGAAATTGCTCCGCAGGCAAAGGAAAATGTGGCAACTCCATAATAATAACAAAACGTGAGGGAAGTTTCAGCTATACACTGAATTTGGTGAAGTT TCCAGCATAACACTTTTTATTATGTTTTAATTCTACTTCCATTTTTCGAGTATGAAAAGAGAGAACCTTACTTTTTTTATCACAAAAAAGGAGGCATGGA GAGAAGGGTAGTTCATCATAGTAAAAGATTGATGGGTGGTTGCTATGAAGCACAGATACGGATACGTGTATCGGATACGATACGTATCTGATACGTCGAC ACGCATTTTTTCTAAAATATAGGATACGAC BLAST
Tissuepods
Gene nameLI_gene_195653; 
Additional informationdetails; 

Expression of Ll_transcript_479812

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_479812
BlastpGranule-bound starch synthase 1, chloroplastic/amyloplastic from Solanum with 72.4% of identity
BlastxGranule-bound starch synthase 1, chloroplastic/amyloplastic from Solanum with 72.4% of identity
Eggnogstarch synthase activity(COG0297)
Kegg-
CantataDBLink to cantataDB annotations (CNT0001477)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019422043.1)
PfamStarch synthase catalytic domain (PF08323.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;