Ll_transcript_480803

• Id Trinity: TRINITY_DN52796_c2_g4_i7
• Name Transcript: Ll_transcript_480803
• Sequence: CATGGTTAAACCTCTCCCCTTAACTTCCTCACGTGACCGCGCTTCTTCTCCGCCTCTCTCAAATAGAAAACGATGGAGGGTTTAAGCAACGCTACTTTCA TGGACTCAACGGAGTTAAAGATAACGGAACTACTGAAGGAGGTTCAAGTTCACCATTCACCTCAATTCATTAAGCTTGTTGATGACACAGTCTCCGCCGT CAAATCATCCATTGAAAAAATCCCCGATGATTTTAAGGTAACTGCGGAACTAGCACCGAAATTTGTTAGCGACATTGGTGCAGATAAGGTGGAGTTTAAG TTTAAGAAGCCATCGTTTATTAAAATTGGTGGCAGTTACTCTATACAGACTCTTGCAAGGCCTCAAGTTAACATTGACCTTATTGTTAGGCTACCGAAGG AGTGTTTCCATGAGAAGGATTATTTAAATTATAGGTATCATGCCAAGAGGTGCCTTTATCTCTGCTTGATGAAGAAGTACTTGGAGAAATCTCCATCTAT TGGTAAGGTTGAATGGTCTACCCTACAGAATGAAGCTAGAAAGCCCTTACTCATTGTTTATCCAGCTGCAAAGCTTGCTGCAGTTCCTGATGTGTCTGTG AGAATTATTCCGTCAGCAACGTCTCTATTTAGCATATCGAAGTTGAACCTGAAGCGTAATAACATTCATGATTCGAATCATGGGGCTGCTCTTCAGGCTA CACCAAAGTACAATTCTAGTATTCTGGAAGACATGTTTTTAGAGGATATAGAAATCATCCACAGATTTTTTATTGGATGGAAGGAACTAAGAGACGCTTT AGTCTTGCTTAAGGTTTGGGCTCGTCAGAGAAGTTCAATACACGTTCATGATTGCCTAAATGGGTTTTTGATTTCTGTCATACTGGCATATCTTGCTTCT AGGCAACAAGTTAATACTTCAATGAAGGCAGCTGAGATATTTCGCTTTACCTTGAACTTCATTGCCACTTCAGTGTCATGGAGACGAGGGCTCTACTTTC CAAAAGAAGGCCAGAGTAATATTACTAAAGAGCAAAGGCTGCAGCTTAAAGAGTCATTTCCTGTTGTCATATGCCATCCATCTGGAGGGTTCAATTTGGC TTTCCGAATGTCTAAGATTGGTTTTACTCAGCTTCAAGAAGAGGCTGCTATGACACTGAAGTGCATTGAAAAGTGTAGAGATGGTGGATTTGAGGAAGTT TTTATGACCAAGATAGACTTTGCTGTTAAATATGACTATTGCATGAGAATAAATTTGAAGGGAAAGAAGGAGGTATATTCTTCTGTATTTTGTTCGGATA ATGAGTGTTGGAGATCATTTGAGGAGAAAATACATGGCATTTTAGCTAAAGGGTTGAACGATAGAGTAAAGTCCATTCGAGTTACATGGAGAAATACACA ATGCCAATGGAGTGTAGATGATGGCTTGTCAGTACTTGATAAAGAGCCATTGTTCATAGGAATTTCGGTCAGTAATTTGGAGAAGGCATTTAGGATGGTG GACATTGGCCCAAGTGCAGAAAGTAAAGATGAGGCTCTTCAATTTCGAAAATTTTGGGGAGAAAAAGCAGAACTTAGAAGATTTAAGGACGGCAGAATTG CAGAAAGCACAGGTGAGTCATTACCTGTTATGACAATTTATTTTGTTGGTCCAGTATGATTATCACATATCTTTCATGTCTTATTGGCTGAGACCAACTA TCTTGATGTTTAGCATGGTAACCTTTTTTCTCTAAAAAATTTAGTATGGGAAACTGCGCAATGGACAAGGCATCTTATCTTGAAAAATATAGCTGAACAT GTGCTTTGTCGACATCTTTCTCTATCCAAGGAAAATATTGTAATTACTGTGGATCAACTTGATTTCTCTTTGCTTCATGGCGCTGGAGGTAACAGTCTTT GTGAATTATCCTTTTTGTCTATTCTGCTTAGCTTACTAACAGCAGCAATACTTTTGGAATGATTAACCTTTTACAGATCCTATATCATACTCTGGAAGTT TGCTAGGGGCATTTGATGTTTTATCAAAGCGCTTGCGTCTTATTGAAGACCTCCCTTTGAAGGTTTCTAGTGTACAGCCTTTAGACTCTGCTTTCAGGCT TACATCGGTCTTCCCTCCTGAACCTCACCTTTTAGCTAATGAAAAAATTGAATCTCCAAGACTGAATAAGTTTGTTCCATCATGCATTCAGCCCCTGGAA GTTATGATTCAGCTGGAAGGTTCAGGGAATTGGCCTATGGATGAAATTGCCATTGAAAAAACAAAATCTAGTTTCCTTATTCAAATTGGAGAGAGTCTTC AAAAGATGTGGGGAGTGGCATGTACTGCCACTGAGAATGATGTGGACGTGCTAATGTCTGGATATGCCTTTCGTCTTAAAATTTTGCATGAGAGGGGCCT TAGTTTGATCAACAAGGAAATTGGGAGTGATCAAGCGAAGCGGGTTCATTCTACTGACAAGAAACTTTTTATTCATAGTCAACATGCTAGTATGATCAAT GGATTACAAAGTCGTTATCCAATATATGCACCAGTAGTTAGACTTGCAAAACGATGGGTTGCTTCACATCTCTTATCGGCTTGCTTGGTAGAGGAGGCTG TTGAGCTATTGGTAGCACATCTCTTTCTAAATCCTTTGCCATTTGATGCTCCTTGCTCGCGGATAACTGGGTTTTTAAGGTAAGTGTGTAAATGATTGTT ACTGGTCTAATCTGCAATCAATATTTTAATAACTCAAAAGAAAAAGGATAGCATTCTTTCATAACAAGGACTAGCTTACTGATCAAGGTTGACCAAAAGC TTCCGCTTGGGAGATATTGAATGTCGTACTAACTACTAAGCATGAGT
• Tissue: pods
• Gene name: LI_gene_195704;
• Additional information: details;

Expression of Ll_transcript_480803

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480803

• Blastp: Nucleolar protein 6 from Xenopus with 29.25% of identity
• Blastx: Nucleolar protein 6 from Sophophora with 23.4% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (431889)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423404.1)
• Pfam: Nrap protein domain 1 (PF03813.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;