| Id Trinity | TRINITY_DN52801_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_491917 |
| Sequence | CTGACAATCATTTAAAAGAGCAAGTTAATTCCCATAACAATCAAGATGCTAACAATGTGTGGGAAAACAATGGATCAATGGCATTGAAAGAGTTGAAAAT GAAAGATGAGGAAGAGGAAAGATTCCAAGCTGATCTTAAAAGAGCTGTACGCCAAAGTTTGGACACATATCAAGCACATGGCAAAGTGCCTCCAGTTTCT GATTTAAGATTGCTGGAGAGAGCTTCCTCCCAAGTAGATAGTTCTGGTTTTGTACTAGAGGACGCCCCAACCAAGGATGTGAGCAGAGCTACTTTGCTTG GTACTGGGCTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCGTTGTGGCATATAAGACGCTTTCGGGAGGAGTTTCTTGG CAGATCAAGATCAGAGCATGATCATGTGGGTAACCCCTGTGTTGTCTGTGCATTGTATGAAATTTTTTCCGCACTGAACCTTGCATCAAAAGATCGAAGG AGAGAAGCTGTTGCACCTACTTCCCTGCGAGTGTCTCTTAGCAATTTATATCCAGATAGTAACTTCTTCCAAGAGGCTCAAATGAATGATGCTTCTGAGG TGCTGGCAGTGATATTTGATTGCCTTCATCAATCTTTTACTCGTAGTTTGAGTGTTTCTGATGCGGAATCTGTGGAAAGCAACTGCACAGGATCTTGGGA TTGTGCAAGCAGTACTTGTATCGCACATTCACTTTTTGGAATGAACATCTTTGAACAAATGAACTGCTATCATTGTGGTCTTGAGTCCAGACATTTGAAG TACACTTCTTTCTTTCACAATATAAATGCGAATGCCCTCCGGACAATGAAGGATATGTGTGCTGAAACTGAAAGCTCCTTTGATGAGCTTTTGAATCTTG TGGAGATGAACCATCAGTTAGCTTGTGATGTAGAAGTTGGTGGCTGTGGCAAGCCCAATTACATCCATCACTTTCTTTCAGCCCCACCCCATGTTTTTAT GACAGTTCTAGGTTGGCAAAATACATGCGAGAGTGCTGATGATATAAAACGTACACTGGCAGCCTTGAGCACCGAGTTAGATATCAGTGTCCTTTATCGT GGTCTAGATCCTAAAAGTACCCATAGCTTGGTTTCGTTGGTGTGCTACTATGGCCAACATTATCATTGCTTTGCATATAGCCATGACTGTCAACAATGGA TAATGTATGATGACAAGACTGTTAAGATAATTGGTGGATGGGCGGATGTTCTTACCATGTGTGAAAGAGGCCATCTACAACCTCAGGTTCTTTTCTATGA AGCTGTAAACTAGTTTACCAGTGGAATTGATAACATCATTTGTCGGACTGAAGAATTCTGAGTTTTACATGGTTTGGCATCCAACTTGTGGCCCTGTTTT ATGCTGGTGCATTTCTGCTCATACAGAGATGGTTTAGGCAAATAAAGTTGCTAGTTTCAGTGACGTCAACAAGTTTTGACATTACCTCAGGTCGGATATA TAGCATTTAAAATTTTAGGCATTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_195751; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_491917
| Blastp | Inactive ubiquitin carboxyl-terminal hydrolase 54 from Mus with 32.68% of identity |
|---|---|
| Blastx | Inactive ubiquitin carboxyl-terminal hydrolase 54 from Mus with 32.65% of identity |
| Eggnog | Ubiquitin specific peptidase(ENOG410XSNE) |
| Kegg | Link to kegg annotations (78787) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464575.1) |
| Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |