Ll_transcript_491763

• Id Trinity: TRINITY_DN52808_c3_g1_i2
• Name Transcript: Ll_transcript_491763
• Sequence: TTGGCTTCCTTATGCAGGTGACACTAATGTTGCCATGTCACCTAGGACACGAATGGTAAGGGGGCTACTTGCCATATTACGTGCTTGCACTAGAAACAGA GCAATGTGCTCAATGGCTGGTCTGTTAGAAGTACTGTTGAGAACAGCAGAAAAAATCTTTATCGTCGATGTCGGCTTAGATGGGCAAATAAGGTGGGATG GAACTCCTTTGTGCCACTGCATACAATACTTGGCTGAGCATTCTCTTACTGTTAGTGATCTACATAGATGGTTCCAGGTCATTACTAGAACACTTACCAC AATTTGGGCTCCACAATTAATACTTTCAATGGAGAAAGCAGTAAGTGAAAAGGAGTCAAGGGGACCAGCTTGCACCTTTGAGTTCGACGGTGAAAGTTCT GGTTTGCTTGGTCCAGGTGAGAGCCACTGGCCATTTATCAATGGTTATGCATTTGCAACTTGGATCTACATCGAATCATTTGCCGATGCATTAAATACTG CTACAGTTGCTGCCGCAATTGCTGCAGCTGCAACTGCTAAATCAGGTAAATCATCAGCTATGTCAGCTGCTGCAGCAGCTAGTGCACTTGCTGGTGAAGG TACAGCCCACATGCCACGACTATTTAGTTTTTTATCTGGTGATAATCAGGGTATAGAGGCTTATTTTCATGCTCAATTTTTGGTTCTTGAAACTTCTAGT GGAAAGGGAAAGAAGTCTTCTTTGCATTTTACCTACCCTTTCAAACCACAATGTTGGTACTTCATTGCCCTTGAACATATTAGCAAGCATGGAATTCTTG GGAAATCAGAAAGTGAAGTTAGGTTATATGTAGATGGATCTTTATATGAAAGTCGTCCCTTTGACTTCCCTAGAATTTCGAAATCCCTTGCATTTTGCTG CATAGGAACTAACCCTCCTCCTACTATGGCGGGTTTGCAACGCCGACGTCGTCAGTGCCCTTTGTTTGCTGAGATGGGCCCTGTTTACATCTTCAAGGAA CCAATTGGCCCAGAAAGAATGACACGCTTGGCTTTTAGAGGAGGGGATGTAGTTCCTTCTTTTGGTACTGCAGCGGGGCAACCATGGCGATCTACAAATT CTCATGTACAGAGCATGGCAGAGGAAAGTGTTCTTTTGGATGCAGAAATTGGAGGTTGCATTCATCTGCTGTATCATCCTAGTTTGCTCAGTGGGCGTTT TTGCCCAGATGCTTCACCTTCTGGTGCTGCAGGAATGCTTCGACGCCCGGCTGAGGTTCTTGGGCAAGTCCATGTTGCTACACGAATGCGACCTGTGGAT GCTTTGTGGGCATTGGCCTATGGTGGTCCCTTGTCTTTGCTTCCCTTGACAGTAAGCAATGTACTCGAGGATACTTTGGAACCAATTCAAGGGGATTTGC TTCTGTCTTCAGCCACTACATCTCTTGCTGCCCCAATAATTCGAATTATATCCATGGCTATTCAAAATCCAAAGAACAATGAAGAGTTGTCTCGTGGTAG AGGGCCTGAGGTTCTGTCAAAAATTTTGAATTATCTTCTCCAAACCTTATCAGGCTTATCTTTGCATGATGTTAGAAAGCATGATGGTGGAAGAGACGAG GAACTCATTGCTGCTGTTGTCTCCCTTTGTCAATCTCAGAAGATGAACCATACACTTAATGCACAACTCTTCACCACACTGCTGTTAGATTTAAAAATTT GGAGTTTGTGTAGTTATGGCATACAAAAGAAGCTCATATCATCACTTGCAGACATGGTTTTCACAGCGTCAAGAGTAATGCGAGATGCTAATGCCATTCA GATGCTTCTTGATGGCTGCAGAAGATGTTATTGGACTGTTCCTGAAATTGACTCGTTGAATACTTTTTCTCAAACAAGGGAAGCACGTCCTGTAGGTGAA ATCAATGCTTTGGTTGATGAGCTCTTAGTGGTAATTGAACTTCTAATTGTGTCCGGATCTCCTTCACTGGCCTCAGACGATGTCCGTTGTTTGCTTGGGT TCATAGTTGACTGTCCGCAACTTAATCAGGTTGCTAGGGTGTTGCATCTCTTCTACAGGTTGTTTGTCCAGCCAAATACATCTAGAGCTCAAACATTTGC AGAAGCATTTCTAGCATGTGGTGGGGTAGAAACTCTTCTTGTTTTGCTCCAGAGGGAATCTAAAGCTGGAGATGGTAGTGTTCTGGATTCATTGTCAAAG AATTCTGAACCAAAAAAAACTGAGATTAACCAGAATGGTGATGAATCAGAGGAGAAAATCGAATCCATCTTACTTGAAAATGATCAAATGTCTCAATCTG TTGATAGTGACAATTGCCCTGATCCTAGTTTTCCTGATGTTAACAATGACAAGATGACATTTACCTCTGAAATTCCTTCTATTAAGAATTTGGGTGGCAT AAGTCTATCCATTAGTGCTGAAAATGCCCGAAAAAATGTATACAATGCTGATAAAAACGATGGCGTTGTTGTTGGGATCATAAATCTATTAGGCGCTTTA GTAGCTTCAGGACATCTGAGATTTGGTTCCCATGCTGGTCCTGGTACAACAAGCAACATTTTGAGTGTTGGAATCCAAGATGGGGGTAGTTCAATGTTTG AAGACAAGGTTTCTCTTCTGCTTTATGCTTTACAGAAGGCTTTTCAAGCTGCACCCAACAGGCTAATGACTAACAATGTTTACACAGCTTTGTTGGCTGC CTCGATCAATGCCTCTTCGTCAGAGGATGGGCTAAACTTCTATGATTCTGGTCATCGCTTTGAGCATTCACAACTTTTGTTGGTGCTTTTGCGTTCCCTT CCATTTGCACCTAGGTCTCTTCAGAGCAGAGCACTCCAGGATATTCTATTTTTGGCCTGCAGTCATCATGAAAACAGAAGCAGTCTGATAAACATGGAGG AATGGCCTGAATGGATTTTGGAAGTCCTGATCTCAAACTACGAGGGTCCCAGTAAATTGTCTGATTCAACAAGTGTTGGAGACATTGAAGACCTTATACA TAACTTTATTATTATCATGCTAGAGCATTCAATGCGCCAAAAAGATGGATGGAAGGATATTGAAGCGACAATTCATTGTGCAGAATGGCTGTCTATTGTT GGTGGATCTAGCACTGGAGAACAGCGAATAAGGCGTGAAGAAGCATTGCCTATATTTAAGAGGAGACTATTAGGCGACTTACTGGACTTTGCTGCTAGAG AATTGCAGGTTCAGACTCA
• Tissue: pods
• Gene name: LI_gene_195822;
• Additional information: details;

Expression of Ll_transcript_491763

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 0.5
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_491763

• Blastp: BEACH domain-containing protein C2 from Arabidopsis with 65.84% of identity
• Blastx: BEACH domain-containing protein C2 from Arabidopsis with 65.4% of identity
• Eggnog: beige BEACH domain containing protein(ENOG410XNQC)
• Kegg: Link to kegg annotations (AT2G45540)
• CantataDB: Link to cantataDB annotations (CNT0001256)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412873.1)
• Pfam: Domain of unknown function (DUF4704) (PF15787.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;