| Id Trinity | TRINITY_DN52820_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_491776 |
| Sequence | CTGACTTTTTTGTTGTTACTGATTCGGTTAAAGACAAAATGATTAGAATGTCTTAACTTAACTCTGAAATCCATAGGAATTTGATTCTGCAACTCTCTCT CTTATTCTCTATTCTGTTTTTCCGATTCAAACCACATCTCTCTCTCTTTCTGTTATTGTTTTTATTTCCTAATTTAATCGAATCCTTTAATAGCTATTTA TTTATACTTAGGGTTTCATTTTCATCATTTCATGTGATTAACAAATTTCGCACTGGGGGCTAATCATTCTCGGCCTCACCGATCTCCGGCGGAGGCTACG GCGGCGTCTTCATCTTCATCACCGTCACCGTCGCATGGTCTCTTCTTCTTTCTTCGCTCTCACAATGTTCCTCCTCTTCACACCCTCGCTCATCTCGATT CCGTGACTCGCTACGCTTCCGATCTCAATCGCCCTGCTTCTCTACCACCACCTCCGCTCATGGATAATTCCGCCAAATCGTCTTCCTCCTCCTCCGCCGT CGTAGCTAACACCGCTCCTCCGCTCCTCGAAGAACCGGAGTACTTGGCGCGGTATTTAGTTGTGAAGCATTCGTGGCGTGGTCGCTATAAGAGGATACTT TGCATTTCTTCTGTTTCTATTGTCACACTTGATCCTTCGACACTCTCTGTCACGAATTCGTATGACGTGGCGGCTGATTTCGAGGCTGCTGCGCCTCTTT TGAGCCGCGATGAGAATTCTAATGAGTTCAGCTTGAGCCTTAGAACCGATGGGCGTGGAAAATTCAAACCTATGAAGTTCTCGTCGCAGTACAGGGCTAG CATTTTGACGGAGTTGCATAGAATACGGTGGAATAGGTTGGCTCCCGTGGCCGAGTTCCCAGTGCTGCATCTTAGGCGAAGGGCGTCTCAGTGGGTTCCT TTTAAATTGAAGGTAACTTATGCTGGTGTTGAGCTTATCGAGACAAGATCAGGTGACCTTCGCTGGTGCTTGGATTTTAGAGATATGGACTCCCCAGCAA TTATTCTCCTCTCTGATGCTTTTGGAAAGAAAAATATTGATCATGGTAGTGGATTTGTTCTTTGCCCATTATATGGAAGAAAATCTAAAGCGTTCCAAGC TGCTTCTGGCTGCACAATATCATCTATCATCTCAAATTTGACGAAAGCTGCTAAATCCACTGTTGGGGTCTCCTTGTCTGTGGAAACTTCCCAAACTCTC TCCATTTCTGAGTATATAAAACAAAGAGCAAAAGAGGCTGTTGGGGCAGAGGATACCCCACTGGGGGGTTGGTCTGTAACAAGATTACGCTCTGCTGCCC ATGGAACTCTAAATGTTCCAGGATTGAGCTTAGGAGTTGGTCCAAAAGGAGGGTTAGGTGAGCATGGCGATGCTGTATCTCGTCAGCTCATTCTTACAAA GACTTCGATTGTGGAAAGGCGCCCTCAGAACTATGAAGCTGTTACAGTTCGTCCTTTATCTTCAGTAAGTGCTCTGGTTCGGTTTGCAGAAGAGCCCCAG ATGTTTGCAATTGAATTCGGCGATGGATGCCCCATCCATGTTTATGCAAGCACATCTCGTGATAACTTACTTGCAGCAGTTCGTGACGTGTTGCAAACTG AAGGTCAATGTGCCATACCTGTATTGCCAAGGCTGACAATGCCTGGGCACCGTATTGATCCTCCCTGTGGAAGAGTTTATTTGCAATATGGTCAACAAAA GCCTGTTGCTGATGCAGAAAGTTCATCTATGTATTTGAAACATTTAGCAGCGGCTGCCAAAGATGCTGTTGCTGAAGGTGGTTCTATTCCTGGATCAAGA GCTAAACTATGGCGTAGAATAAGGGAGTTCAATGCCTGTATACCATATAGTGGAGTGCCTCCAAGCATTGAGGTACCGGAGGTTACTTTGATGGCCTTGA TTACTATGCTTCCTGCCGCCCCAAATCTTCCTCCAGAGTCTCCTCCTTTGCCACCCCCTTCACCAAAAGCTGCTGCAACTGTGATGGGATTTATTGCATG TTTACGTAGACTACTCGCTTCAAGAAGTGCAGCTTCACATGTGATGTCTTTTCCAGCAGCAGTTGGAAGGATAATGGGTTTACTCAGAAATGGTTCAGAA GGTGTGTCATCTGAGGCTGCTGGGCTTGTTGCTGTACTTGTTGGTGGTGGACCTGGTTATGCAAATCTAACTGATTCTAAAGGAGAGTGGCATGCAACAA TTATGCATACGAAGTCAGTATTGTTTGCTAATCATAGTTATATCATTATTCTTGTCAACAGACTAAAGCCCATGTCTGTATCACCTTTACTGTCAATGGC TGTTGTTGAAGTGCTTGAGGCTATGATTTGTGATCCACATGGAGAGACTACCCAATATACTGTTTTTGTTGAGTTGTTACGCCAAGTTGCTGGGTTGAAG CGTCGCTTATTTGCACTGTTCGGTCATCCTGCTGAAAGTGTTAGAGAAACGGTAGCTGTGATTATGCGATCAATTGCTGAAGAAGATGCTATTGCTGCAG AGTCGATGCGGGATGCTTCTCTGCGTGATGGTGCTTTGTTGAGGCATTTACTGCATGCATTGTTCCTTCCTGCTGGTGAGCGCCGTGAAGTTAGTCGACA ACTTGTTGCTCTTTGGGCTGATTCCTATCAACCAGCTTTGGATTTATTGTCTCGAATTCTGCCTCCTGGCCTTGTTGCTTATTTGCACACACGTTCTGAT GGAGTTCCTGCTGAAGATACAAATCCAGAAGAGTCGTCAATAGGGAAAAGAAAAAGACGTTTACTTCAACAGAGAAAAGGTCGCATAGGGAGAGGATTAG CCTCTAATGAACAACCTTTCCTTTCAGATAATAATTTTGATGTTTCTGATCCAGGTAGGCAGACAGGGTCAGCTGTTGTTAGAGGCCCAGAAAATTATCA TAGAGCTGCTCTAGACCCAACCTCTGGACAACCTTCAAGTATTCAACCTTCAGTTGTGCTCACTAATGAAAATTTGACCAATGGGTCTTCTACAGGTGAT TCTCAAAATGGGTATCCTAATTTTGTTGCTTCGACTGTTGTGTCATCGACAAACACAAATGAAGCACCTGGATCTGATTTTTCAAATTCAGCTGATCCTG ACAGCAGTGCAGTTGGTTTTCAGAGTGAGGGCATTCCAGCTCCTGCTCAAGTTGTTGTGGAGAACACCCCTGTGGGATCTGGTCGACTTCTATGTAACTG GCCTGAATTCTGGCGAGCATTTGGTCTTGATCACAATCGTGCAGATTTGATTTGGAATGAACGGACCAGGCAAGAGCTGAGGGAATCATTGCAGGCTGAA GTTCATAAACTAGATGTTGAGAAGGAGCGTACAGAAGATATTGTTCCAGGGGGTGCCACTGTAGAAACGGTGACCGGGATTGAGAGTGTGCCACAAATAT CTTGGAATTACCCTGAATTTTCTGTTCGTTACCCAAGTTTGTCAAAAGAAGTTTGTGTTGGTCAGTATTATCTGCGTCTACTGCTTGAAAGTGGCAGTGG TGGCCGGGCACAAGACTTCCCGTTGCGTGATCCAGTTGCTTTCTTTAGAGCATTGTACAATCGATTTTTATGTGATGCTGACACAGGGCTTACTGTAGAC GGTGCTGTTCCTGATGAATTAGGTGCATCTGATGATTGGTGTGACATGGGTAGATTAGATGGTTTTGGTGGAGGTGGTGGGTCATCAGTGAGAGAGCTTT GTGCAAGGGCAATGGCAATTGTATATGAGCAGCATTTCAAGACCATTGGTCCATTTGAAGGCACAGCTCATATTACTGTTCTCTTGGATAGGACTGATGA CAGAGCTTTGAGGCACCGGCTTCTTTTGCTTCTGAAGGCATTGATGAAGGTTTTATCGAATGTAGAGGATTGTGTTCTAGTTGGAGGTTGTGTGTTAGCA GTTGATCTTCTCACAGTTGTCCATGAAACTTCAGAGAGGACAACTATTCCCTTGCAATCAAATTTGATTGCTGCTAGTGCTTTTATGGAGCCACTCAAGG AATGGATGTATATCGACAAGGATGGTGCTCAAGTTGGACCCATGGAAAAGGATGCTATTAGAAGGTTATGGTCTAAGAAGACTATTGATTGGACAACAAG GTGTTGGGCGTCTGGGATGCTAGATTGGAAGAAGTTGCGTGATATTCGTGAGCTTCGTTGGGTACTTGCCGTCAGAGTTCCTGTCCTTACCTCACCTCAG GTTGGGGATGCAGCTTTGTCCATATTGCATAGCATGGTTTGTGCTCATTCAGATTTAGATGATGCTGGAGAGATTGTTACTCCGACTCCTAGAGTAAAAC GAATCTTGTCGAGCCCACGGTGCCTCCCACACATTGCGCAGGCCATTCTTTCTGGGGAACCAAGTATTGTTGAGGCAGCTGCTGCTTTGCTGAAGGCTAT TGTTACTCGGAACCCCAAGGCCATGATACGTTTATACAGCACTGGTGCGTTCTATTTTGCATTGGCTTATCCTGGATCTAATCTACTTTCAATTGGGCAA CTTTTTGCTGTCACCCATGTCCATCAAGCATTTCATGGTGGCGAAGAGGCTGCAGTTTCAAGTTCATTGCCATTGGCAAAACGTAGCGTTCTTGGTGGAC TTCTCCCTGAATCGTTGTTGTATGTACTGGAGCGTAGTGGTTCAGCAGCATTTGCTGCAGCCATGGTTTCTGATTCTGACACTCCTGAGATAATTTGGAC TTACAAAATGAGGGCAGAAAATCTAATATGTCAGGTTTTGCAGCATCTTGGTGACTTTCCACAGAAACTGTCACAACATTGCCATGTTTTATACGACTAT GCCCCAATGCCTCCAGTGACATATCCAGAGCTGCGAGATGAAATGTGGTGTCACCGTTATTATCTCAGGAACTTATGTGATGAGATTCGTTTTCCGAATT GGCCTATTGTTGAACATGTAGAGTTTTTGCAGTCATTGCTTGTAATGTGGCGTGAAGAGTTGACTAGAAAACCTATGGATCTTTCCGAAGAAGAAGCTTG CAAGATCCTTGAAATATCCTTGCAGGATGTATCTAATGATGATGTTAATAAAAAGCATTCTTCGGAGGTTGTAGACGAAGCATCTAGCTTATCAAAGCAG ATTGAGAACATTGATGAAGAAAAGTTAAAGCGACAATATCGGAAACTTGCTATGAAATATCATCCTGACAAAAACCCAGAAGGAAGGGAGAAGTTCCTTG CTATACAGAAGGCCTATGAACGCCTCCAGGCTACCATGCAAGGCTTGCAAGGCCCTCAGCCTTGGAGACTGCTTCTTTTGTTGAAGGGTCAATGCATTTT ATACAGAAGATATGGAAACATATTGGAGCCATTCAAATATGCTGGCTACCCTATGTTGCTGAGTGCTGTTACTGTGGACAAGGATGATAACAACTTTCTT TCTTCAGACAGAGCACCTCTCCTTGTTGCAGCATCAGAGCTTGTCTGGCTAACATGTGCATCTTCTTCATTGAATGGTGAAGAAATGGTAAGAGATGGAG GGGTACATCTTCTCGCAACCCTTCTATCCCGTTGCATGTGTGTTGTTCAGCCAACTACTCCTGGAAATGAAACTTCTGCAATCATCGTTACAAATATCAT GCGGACATTTTCAGTTCTTAGTCAATTTGAGGCTGCGAGAACTGAGATACTTGAATTTTCTGGATTGGTTCAGGATATTGTGCACTGCACTGAATTTGAG CTTGTACCTGCAGCTGTTGATGCTGCTCTACAGACTATAGCTAATGTTTCTGTTTCCTCAGAATTGCAAGATGCTTTACTGAAGGCTGGTGTTTTATGGT ACCTTTTACCACTGCTGTTTCAGTATGACTCTACTGCAGAAGAATCTGGTGCAACAGAATCACATGGTGTTGGCGCTAGTGTTCAAATTGCAAAAAACAT GCATGCTATTCAAGCATCCCTAGCTTTGTCAAGGCTCAGTGGTTTGTGTGGTGACGGGAGTTCAATACCCTACAATGGGGAAGCAGCTAATGCGCTCAAA GTTTTGCTAACTCCTAAGCTTTCTAGCATGCTAAAAGATCAAATACCTAAAGATTTGCTGTCCAAATTAAACGCAAACCTGGAGTCGCCGGAGATTATCT GGAACTCTTCAACACGAGCAGAACTGCTGAAATTTGTGGATCAGCAACGTGCAGCTCAAGGCCCTGATGGCTCATATGATATAAAAGATTCACATGACTT TGTCTACAAAGCACTATCAAAAGAATTATTCATTGGCAATGTTTACTTGAGAGTCTACAATGATCAGCCAGAGTTTGAAATTAGTGAACCTGAAGCTTTT TGTGTTGCTCTAATTGATTTTGTATCATCTCTTGTGCACAATCAATTTGTTGGCGATGCTGATCATAATGTTGAGGACACCAATAAGTTTATTCAGACTT CTGAGCATCCAAGTGATGCTGTTGATGGATTTGCTGATGAGCAGCATGTCCAGGATAATTCTGGTACAATGTCCGATGAACAAGTTATAGGGAAGGAAGA AGTTCCGCTGGTTAAAAATCTTCGTTCTGCATTGACCTCCCTCCAGAACCTACTTACTAATAACCCGAATTTGGGGTCCATATTTTCTAATAAAGACACA TTACTGCCTCTTTTTGAATGCTTTTCTGTGCCGGAAGCATCATACAGTAACATTCCTCAGCTTTGCCTAGCAGTGCTGTCACTCTTAACAGCGCATGCAC CTTGTTTGCAAGCCATGGTTGCAGATGGATCTAATCTTCTCCTTTTATTACAAATGCTTCACTCAGCCCCAAGTTGTCGTGAAGGGGCTCTCCATGTTCT CTATGCATTGGCAAGCACTCCAGAACTGGCCTGGGCAGTTGCCAAGCATGGCGGTGTTGTCTACATTATTGAATTGCTTTTGCCTTTGACGGAAGAAATT CCACTCCAGCAAAGAGCTATGGCGGTCTCATTGTTGGGAAAGCTTGTTGGACAACCGATGCACGGGCCTAGAGTTGCCATAACACTTGCAAGGTTTCTTC CAGATGGTCTTGTATCAGTAATTAGAGATGGACCTAGTGAAGCTGTTGTTGTTGCCCTTGACCAGACTACAGAGACGCCAGAACTTGTATGGACGCCAGC AATGGCTGCTTCCTTATCTGCACAAATTTCAACTATGGCATCAGAACTATACCGTGAGCAGATGAAAGGTCGAGTTGTTGATTGGGATGTACTCGAGCAG GCATCTGGGCAGCTGGAAATGAGAGATGAGCCTCAGGTTGGTGGCATTTATGTTCGGCTGTTTCTGAAAGATCCCAAATTTCCTCTGAGAAATCCTAAAA GATTCTTGGAAGGGCTATTAGATCAGTATCTGTCATCCATTGCTGCTACACATTATGAGGCTCAAACTGTTGACCTGGAGCTGCCTTTGCTTCTCTCAGC TGCACTGGTTTCATTACTGCGTGTGCATCCTGCACTAGCAGATCATGTTGGATATCTTGGGTATGTACCCAAACTAGTTGCTGCTGTTGCATATGAGGGA AGGCGAGAAACAATGTCATCGGGTGAGGTAAACAACGGAGAACATGCAGATAAAACATGTGATCCGGTTAATGGATCAACAGAACAGACACAAACTCCTC AAGAAAGAGTACGCCTGAGTTGTTTGCGTGTCCTGCATCAACTTGCAGCTAGTACCACATGTGCTGAAGCCATGGCAGCAACAAGTGTTGGAACACCTCA GGTTGTTCCACTGCTAATGAAAGCTATAGGGTGGCAAGGTGGAAGCATTTTAGCTCTTGAGACCTTGAAACGAGTTGTGGTTGCAGGAAACCGAGCCAGG GATGCTCTTGTTGCTCAAGGGCTTAAGTGAGTACCTATATATTCAAAAACTGATCCACCTTTAATTAATCCAATTTTTTATTCTTTGAAGATCTAAATTT ATCACAGCTTTGCACAACGTATGATGATAAACTAGGAAAAGATGCAAATGAAATAGAAAACTCATGAAAGAATTATTAGGCCTGTTTTTTATTTGTTTGC TTTTGCAAAATCTTGGCATATTTTCTTGTGCCCCCCTTGTTTAGTAGATTTGGAGTTCACTCATGTTAGCATTCTATGACATTTGAAGTTGGAGCGTACC ATTAAATAAATCCAATTAACTCCCAACAATTGTATATTCCTACATCATTTTCTCTTACTTCATCATCTACACTTTATCTTACCTTGTATCTCTCTCTTCC TTTGAAATGTGTGTCTATTGTCATTGCAACCAAGTGGTGTTCCTGCTATTGGAGGGATTTACTGTAAGATTGAACGAATAATACTCTTGATAAATTACTG ATTCTCTTATCAAAATAATTTCATCGTAACACTTATGGAGGTGCCTGTGGGAAGACTGTCTGTGCGTTGATGCAAGTAGAAATGTCAAATTGTAAATTCT ATCTTACTCCTAACACTAAACAATTTCAAACAATGCAGAGTTGGTCTTGTTGAAGTACTTCTTGGACTTCTTGATTGGAGGGCCGGGGGAAGGAATGGGA TTTGTTCTCAGATGAAGTGGAATGAATCTGAAGCATCTATTGGCAGGGTGCTTGCTATTGAGGTATTGCACGCCTTTGCTACTGAAGGAGCCCATTGTTC TAAAGTGCGAGAAATATTGAATAATTCTGATGTTTGGAGTGCATACAAAGACCAGAAGCATGATCTCTTCCTTCCTTCAAATGCACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_195965; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_491776
| Blastp | DnaJ homolog subfamily C GRV2 from Arabidopsis with 75.97% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily C GRV2 from Arabidopsis with 76.2% of identity |
| Eggnog | DnaJ (Hsp40) homolog, subfamily C, member 13(ENOG410XRI2) |
| Kegg | Link to kegg annotations (AT2G26890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452063.1) |
| Pfam | Domain of unknown function (DUF4339) (PF14237.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |