Ll_transcript_494335

• Id Trinity: TRINITY_DN52825_c3_g2_i12
• Name Transcript: Ll_transcript_494335
• Sequence: CAAGTTTTGTTGTTGGGTTTTGATGGTGTTACTTTGATTAAGGGGAAGAGTAAAACTGTGGATTTGTGTCTTCTTTCTGTGCCAGGTGTTCAGTGTTTAG CTTGGTTGGTATTAAGCTTCTCAGCTTTGCATTGCAAATTCAATGTGTCTGAAAAGTTTCCAATTTTGTTGAGAGTTTGGTGGATTGTGTCGTTTGTTAT TTGCTTGTGTGTTTCGTATGTTGACGGGAGAGGGTTTTGGGTAGAAGGTTCTAAGCACGTAGGTTCACACGTTGTGGCGAATTTCGCTGTCACTCCTGCT TTAGCTTTCTTGTGTATTGTTGCAATTCGGGGTGTTACTGGTATAGAAGTTTATAGGAATTCCGAGATTGAAGAACCGTTGCTTGTTGAAGAAGAACCGG GTTGTCTCAAGGTTACTCCTTATAGTGATGCTGGACTTTTCAGCTTGGCCACTTTGTCTTGGCTGAACCCTCTTCTTTCCCTTGGTGCAAAGAGACCACT TGATCTTAAGGACATTCCCCTTGTTGCACAAAAAGATAGAGCTAAGACCAATTATAAGATTTTGAATTCGAATTGGGAGAGATTGAAGGCGGAAAATCCA TTGAAGCCGCCTTCATTAGCGTGGGCACTTCTGAAATCATTTTGGAAAGAGGCGGCATTTAATGCAATCTTTGCTGGCTTGAATACTCTTGTCTCATATG TAGGTCCGTACATGATAAGTTACTTTGTTGATTACTTGGGTGGTAAAGAGATTTTCCCTAATGAAGGGTATGTCCTTGCGGGAATTTTCTTTGCGGCGAA GCTTTTGGAGACTTTCACAACTCGGCAGTGGTATCTAGGAGTGGATATCTTAGGCATGCATGTTAGATCAGCTCTAACGGCAATGGTGTACCGAAAGGGG CTAAGACTCTCGAGCCTAGCAAAGCAAAGTCACACGAGTGGTGAGATTGTTAACTACATGGCTGTGGATGTTCAAAGGGTAGGGGATTATTCTTGGTACC TTCATGACATGTGGATGCTTCCGCTGCAGATTGTTCTCGCTCTCGCAATTTTGTATAAGAATGTCGGTATTGCTTCTATCGCAACACTCATTGCCACAAT CGTTTCCATTGTTGTCACTATTCCTATAGCGAGGGTCCAAGAGGATTACCAAGACAAATTAATGGCTGCCAAGGATGAAAGGATGAGAAAAACATCTGAG TGCTTGAGGAATATGCGAATTCTCAAGCTGCAAGCTTGGGAAGAAAGATATCGAATTAAATTGGAGGAAATGCGTGGAGTGGAGTTCAAGTGGCTAAGGA AAGCCCTCTATTCTCAGGCGTTCATAACTTTCGTATTCTGGAGTTCTCCTATATTTGTTTCAGCTGTCACTTTCGCTACTTCCATATTGCTCGGTGGCCA GTTAACTGCAGGTGGTGTTCTTTCGGCTCTTGCTACTTTCAGAATCCTGCAAGAACCTTTGAGGAATTTTCCGGATTTGGTGTCAACTATGGCCCAGACA AAAGTTTCCCTTGATCGAATATCCTGTTTCCTGCTGGAGGAAGAGTTGCCGGAAGATGCAACTCTTAACTTGCCTCATGGTATTTCTAATATTGCTGTAG AGATTAAGGATGGTGTCTTCTGCTGGGACCCTTCTTCTTCGAGGCCTACTCTGTCAGGGATACACGTCAAAGTTGAAAGAGGAATGCGTGTGGCGATTTG TGGTATGGTTGGTTCTGGGAAATCGAGTTTTCTTTCTTGTATCCTCGGAGAGATTCCTAAGCTTTCTGGTGAAGTAAGGGTGTGTGGCTCTTCTGCATAT GTCTCCCAATCAGCATGGATACAGTCCGGAAATATAGAAGAAAATATCCTCTTTGGAAGCCCAATGGACAAAGTAAAGTACAAGAATGTTCTTCACGCTT GTTCACTGAAAAAGGACCTGAAGCTTTTCTCACATGGAGACCAAACAATTATTGGTGATAGAGGTATAAACCTGAGTGGTGGCCAAAAGCAGCGGGTTCA GCTTGCACGAGCACTCTACCAAGATGCTGATATTTATCTCCTTGATGATCCCTTCAGTGCACTTGATGCCCACACTGGATCAGAATTGTTTAGGGAGTAT GTATTGACAGCACTAGCAGATAAAACTGTCGTTTTTGTAACCCATCAAGTTGAATTTCTTCCTGCTGCTGATATGATACTGGTTCTTAAGGAAGGCCACA TCATACAAGCAGGAAAATATGATGATCTTTTGCAAGCAGGAACGGATTTTAACACTCTAGTGTCAGCTCATCATGAAGCAATAGAGGCTATGGACATTCC TAATCACTCTTCAGAAGATTCGGATGAAAATGTGCCACTGGATATATCTGTTATGAACTGTAAGAATTCCATTTCTTCTGCAAATGATATTGACAGCTTG GCGAAGGAAGTGCAAGAGGGAACATTAGATCAAAAAGCAATTAAGGAGAAGAAGAATGTGAAACGCTCAAGAAAAAAACAGCTTGTTCAGGAAGAGGAGA GGGTTAGAGGTAGAGTCAGCATGAAGGTTTACCTGTCATACATGGCTGCAGCATACAAAGGCTTATTGATTCCACTCATAATCATTGCACAATCATTATT TCAGTTCCTTCAGATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGAGACCAACCCAAAGTAACTCCCTCGGTTCTTCTTCTTGTT TACATGGCCCTTGCTTTTGGTAGCTCGTGGTTTATATTTGTAAGGGCTGTTCTGGTGGCTGCATTTGGTCTATCTGCTTCACAGAAGCTATTTTTCAAGA TGCTTAGAAGTATTTTCCATGCACCGATGTCTTTCTTTGACTCCACACCAGCCGGAAGGATCTTGAATCGTGTTTCAGTTGATCAAAGTGTTGTGGATCT TGATATTCCTTTTAGACTTGGCGGGTTTGCTTCAACAACAATACAGCTAATTGGCATTGTTGCTGTAATGTCTGAAGTTACATGGCAAGTTTTGCTCCTA GTTGTCCCAATGGCTGTTGCTTGCTTGTGGATGCAGGTACTAGAGATCTTCCTGCTTAAATTTTTAATCAAACAGTTTTTCCCCCCAAAAAGGCCTGTCG AAGATAAGTTGTGTTTTGTTGGCCAAAAACCAAGTCATGAAGGATACAATAAGAAATACTACATGTCGTCCTCAAGGGAATTGGTACGTATTGTAAGCAT CCAGAAATCTCCGATTATAAATCTTTTTGGTGAATCAATTTCTGGAGCAGCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGAAACCTT TATCTCCTGGATGCTTTTGCTCGACCATTCTTC
• Tissue: pods
• Gene name: LI_gene_196008;
• Additional information: details;

Expression of Ll_transcript_494335

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.4
• PS2: 0.1
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494335

• Blastp: ABC transporter C family member 5 from Arabidopsis with 76.35% of identity
• Blastx: ABC transporter C family member 5 from Arabidopsis with 76.17% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT1G04120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455530.1)
• Pfam: ABC transporter transmembrane region (PF00664.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;