| Id Trinity | TRINITY_DN52826_c5_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_492312 |
| Sequence | GTCAGGTGGCCAAGGCGCAACTCAGGGAAGGGCTATTAAGTGATGCAATTGAGTCATTTATACGAGCAGATGATGCCACACAATATTTGGATGTTATCCG TGCTGCTGAAGACTCTGATGTTTACCATGACTTGGTAAAATACTTGCTGATGGTAAGACAGAAGGCTAAAGAACCGAAGGTGGACAGTGAGCTTATATAT GCGTATGCAAAGATTGATAGGCTTAGTGACATTGAAGAGTTCATTCTTATGCCCAATGTTGCTAATCTTCAAAATGTTGGTGACCGGTTGTATGATGAAG AATTATATGAGGCTGCAAAAATCATATTTGCTTTTATATCTAACTGGGCTAAATTAGCTATAACGCTGGTGAAGTTAAAACAGTTCCAAGGTGCTGTTGA TGCAGCAAGAAAAGCCAATAGCTCGAAAACCTGGAAGGAAGTTTGCTTTGCTTGTGTTGATGAAGAGGAGTTTCGTTTGGCCCAGATATGTGGGCTCAAC ATTATTATTCAGGTGGATGACTTGGAAGAGGTCAGTGAATATTACCAAAATAGAGGTTGCTTCAATGAGCTAATATCCCTCATGGAGAGTGGTTTAGGAT TAGAACGAGCACATATGGGCATCTTCACCGAGTTGGGAGTTCTGTATGCTAGATACCGTCCTGAGAAGCTTATGGAGCATATCAAACTATTTGCCACCCG ACTCAATATTCCGAAACTCATAAGAGCTTGTGACGAACAACAGCACTGGAGGGAACTGACCTATTTGTATATCCAATATGACGAATTTGATAATGCTGCA ACAACCATCATGAACCATTCACCTGAAGCATGGGATCACATGCAATTCAAAGATGTTATTGCCAAAGTTGCTAATGTGGAGTTGTATTACAAGGCTGTTC ACTTCTATTTGCAAGAGCATCCAGATCTTATCAATGATGTACTGAATGTCCTTGCCCTTCGTGTTGATCATGCACGTGTTGTTGACATCATGCGAAAGGC TGGTCATCTTCGCCTGGTCAAGCCATACATGGTTGCAGTTCAGAGCAACAATGTGTCTGCTGTTAATGAAGCCTTGAATGAGATATATGTTGAGGAGGAA GACTATGACAGATTGCGCGAGTCAATTGATTTGCATGATAACTTTGATCAAATTGGCCTTGCACAGAAGATTGAAAAGCATGAGCTTCTCGAGATGAGGC GTGTTGCTGCTTATATTTACAAGAAGGCTGGTAGATGGAAGCAGTCCATTGCCTTGTCAAAGAAGGATAATCTTTACAAAGATGCCATGGAGACAGCATC TCAATCTGGTGAACGGGAACTTGCGGAGGAGTTGCTTGTTTATTTTATTGATCAGGGCTAGAAGGAATGCTTTGCCTCGTGTCTCTTTGTTTGCTATGAT TTGATCCGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_196020; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_492312
| Blastp | Clathrin heavy chain 1 from Oryza sativa with 91.37% of identity |
|---|---|
| Blastx | Clathrin heavy chain 1 from Oryza sativa with 91.24% of identity |
| Eggnog | clathrin heavy chain(ENOG410XPH1) |
| Kegg | Link to kegg annotations (4349546) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460712.1) |
| Pfam | Region in Clathrin and VPS (PF00637.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |