Ll_transcript_494610

• Id Trinity: TRINITY_DN52827_c5_g1_i5
• Name Transcript: Ll_transcript_494610
• Sequence: TCTTGTCCTCATACTCACCATCAACAAGGCACTGTTGAAAGAAAGCATAGGCACATAGTTGAAACTGGCCTAACCTTACTTTCTCATGCTGGTTTACCCC TCACATTTTGGGAATTTGCCTTCACTACTGCTGTGTTTCTAATCAATAGACTTCCCTCTGCCACCCTCAATAATCTTTCTCCATTTTTTCTTCTCTTTGG CAAAGATCCATGTTATACTTCTCTAAGAATTTTTGGTTGTGCCTGTTTTCCATTACTCAGGCCCTATAATGCTCACAAACTAGCCTATAGGTCCACTGAA TGCACCTTCCTAGGCTACTCATCCATGCACAAAGGTTACAAATGTTTATCCCCTGATGGCAGAATTTACATCTCTAAGGATGTCAAATTCAATGAATCTG CCTTTCCCTTCAAAACTTCAAATAATACCAGCCCTTCCTTCTCTAACCCTCATATAAATGATGGCATTTTACCTACCCCTACCCACACTCACACCTTCAC AGAAACCTTACATCCCTCATCCAACCCATCACCCACTTCCATCACCAGCTCTCCTAGCTCTAGTTCCCATATTCCTCATACACCCTCAACCCCTACAACT GCCTCCTCAACCAATAATTCCAGTACCAACTCCAATAACCCTCATTCTTCACCTACCACTACTACCTCTCCATTACCATCCTCCCCTACCACTGCCCCTG CAGATTCAGACTCATCCCTTTTACCCCTACCACCTACCTCTGCTCCCATTCCCTCTCACCCTATGACTACTAGGTCCAAAGCTGGGATCACTAAATCAAT TCTTCCCAATCTTGCAAGTCTTTTCCTTGTTCATACTGAACCATCCTCAGTTAAGGAAGCTCTCCTTAACCCTACTTGGAAAAGTGCTATGCAAGAGGAG TATGATGCCCTGCTGAAGCTTGGTACCTGGACCCTAGTTCCTCTACCACCTCACAAGAAGGCTATTGGTTGCAAATGGGTGTTTAGGATCAAAGAAAATC CTGATGGCACTATTAACAAGCACAAAGCTAGGCTTGTTGCCAAAGGTTTTCATCAACAACCTGGCATTGACTATAATGAAACCTACTCCCCTGTCATCAA GCCTGTAACCATCAGAATATTACTCACATTGGCTGTTTCCTATGGTTGGGCTATTCAACAACTTGATATTAACAATGCTTTTCTAAATGGGGTGTTACAT GAGCATGTATATATGACTCAACCTACTGGTTTTCACAATGGAGACAAGACCACTGTATGTAAACTCAATAAGGCCTTGTATGGTCTAAAACAGGCTCCTA GGCAATGGTTTGAGAAGTTCAGAAGTACTCTACTTCAGTTGGGGTTCAAAAACAGTAAATGTGACAATTCTCTCTTCATCTCTATCTCTTCATCTCAACT TTTTGTCCTGGTTTATGTGGATGATATTATCATCACTGGTTCTTCTAAACCTCAAATTTCCAACCTGGTTCATAAACTTAGTGCTGCTTTTGCTCTAAAA GAATTGGGCAATCTGGATTACTTCTTAGGTATTGAAGTTAAGCATCTTCATGATGGCTCTCTCTTGCTCACTCAAACCAAGTACATCAAGGATCTTCTTA GGAAAGCTAACATGGACAGTGCTAAACCAAGTCTCACCCCCATGGCCACTACTTGCAGGCTATCTCGCAGTGAGTCCAAAGTCTTTGATAATCCTACACT CTACAGGTCTGTGGTTGGTGCTCTTCAATATGCTACCATTACTAGACCTGATCTTGCTTTCAGTGTTAATAAGGTTTGCCAATTCATGGGAAATCCTCTT GAACAGCATTGGGTTGCTGTTAAAAGAATCCTAAGATATCTACAAGGCACTCTCACTCTTGGTATTCATCTCAAGGCAGCTATTTCAAGTCCCTCTATTC CCTTCTCTCTAACTGGTCTATGTGATGCAGATTGGGCTACTGATATTGATGATAGGAAATCTATTTCAGGGGCTTGTCTATTTGTGGGGCCTAATCTTGT CACTTGGTGGTCCAAGAAACAGCAGACAGTCTCAAGATCCAGCACTGAAGCTGAATACAGGAGCCTTGCCCTTGCTGCTCAAGAAATGATTTGGATTGAG TCCTTACTTTCTGAACTCAAAATCCCTCATCAAGTTCCTCTTGTTCTATGTGACAACTTAAGCACTGTGAGCATGTCTCACAATCCTGTGTTGCACAATA GAACTAAGCACATTGAACTTGATTTGTTTTTTGTAAGAGATAGGATTCAAGCCAAAACTCTTCAAGTGAAACACATCCCTTCTGATTTCCAGACAGCTGA TGTGCTCACCAAGCCTTTGGCTACTGATAGGTTTCTCATCCTAAGAAAGC
• Tissue: pods
• Gene name: LI_gene_196026;
• Additional information: details;

Expression of Ll_transcript_494610

FPKM

• PAB: 0.3
• PNAB: 0.9
• PS1: 1.1
• PS2: 1.3
• PS3: 1.3
• PW1: 0.5
• PW2: 1
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494610

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.6% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 41.12% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414575.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;