Id Trinity | TRINITY_DN52836_c9_g2_i1 |
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Name Transcript | Ll_transcript_493144 |
Sequence | GATCCCTTCTCTTCACCAGCAACAGAAGCATCGTCGTCGTCATCACCCAAATAACTCAACGAGTCAAACCCTTTCTTCTTATTCTCAATTCTTCTTTTTC TCTCATTTCAATCTTTTCCTTTCAAACTTTCTAAATTTTATTCTTCTCAGTTATGCCCTTCTTTACAATTTCATAATTTTCAAACCCTTTTCTCATTATT CCTCAAATTTCATTTTTTCCGCGGAAACCCTAATTCCCAAAACCCCAATTTTTCTCACTTCCCCAATTAGCTTCTGGATATTGGTGGAAGAACCGGAATA ATTGAAATTCACGATTTCGCCCCCAAAACCCTAGTTTTGGATCTTGCTTAGGAGTTCAAATTCCCGAGCTTTATCTCGCATTAGATTAATAATTACAGCT ACATATAGCGGTATGATGCTGATGGCAGTATGCCGGTTATAGTTGGGGGAAATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTTAATAACAGTG CAATAGGTGGGCCATCGTCTAGGGACACTGGAAAATCTGACTCATCTTTGCCAGCTAACTTCCCTGTAAATTCAAGACGACAACAACCACAGTTAGCCCC CTACAAGTTAAAGTGTGATAAGGAACCTTTAAACTCTAGGCTTGGGGTGCCAGACTTTCATCCCCAAACACCAAATTGCCCCGAGGAAACTCTGACTAGA GAATATTTGCTATCTGGATATAGGGATACTGTTGAGGGACTTGAGGAAGCTAGAGAAATTTCACTGACCCAGGTTTCAAATTTTAACAAGACAGTTGTTC TTAATTGTAAAGAGGCCATTAGAAAACGTCTAAGGGCCATCAATGAGTCTCGTGCTCAGAAGAGGAAGGCTGGTCAAATATATGGAGTGCCTCTTTCTGG ATCACAACTTGCTAAGCCTGGTATTTTCCCAGAACTAAGGCCATGTGGTGAAGACTTCCGGAAGAAATGGATTGAGGGCTTATCTCAACCACACAAGTGA TTACGCTCTTTGGCTAATCAAGTTCCTCATGGTTATAAAAGGACGCTACTCTTAGATGTTCTTATCAAGAATAATGTTCCATTGCTGAGGGCCACTTGGT TTATAAAGGTTACTTACCTTAACCAGGTTCGACCTGGTTCTGTTGGTATTTCTTCTGGGACTGCTGACAAAATACAGCTGTCCCGTTCTGAGGTCTGGAC CAAAGATGTTATCAATTACTTGCAGACTCTTCTCGATGATTTTTTATCAAAAAATACTTCTCATTCTACTCTGCGTTCTACTCCTCATGCTCGAGAGCGA TCAGCACAAATGGTTTATACTGGATCAATGCAACACAAAAATGACCCTTTGTTATCTGTTTCTGATAGTGAAGATCCGTCCTTGCATTTCAGATGGTGGT ATATCGTGCGGCTTCTGCAATGGCATCATACTGAAGGGCTGCTTCTTCCTTCTCTTGTCATTGATTGGGTTTTGAGTCAACTACAGGAAAAAGATCTGCT TGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGCTTTTTAGAAACTGTTGTTCTTTCTCAAACTTATGTGCGCACTCTTGCTGGAATAGCTCTTCGT GTCATTCGTGATCCTGCTCCAGGTGGATCCGATCTAGTAGATAATTCCCGGAGGGCATATACAACTTATGCTCTGATTGAGATGCTTCGGTATTTGATAC TTGCAGTGCCAGATACTTTTGTTGGTTTGGATTGCTTTCCTTTACCATCGTCCGTGGTTTCACATACAATAAATGATGGAAATTTTGCATTAAAATCAAT TGAAGCTGCAGGGACCATAAAAAATAGTACAGATGATTTTGGTCATGTTGTTTCAAGCATTCATAAAAATGCAGAATATCT BLAST |
Tissue | pods |
Gene name | LI_gene_196125; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_493144
Blastp | Mediator of RNA polymerase II transcription subunit 12 from Arabidopsis with 59.89% of identity |
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Blastx | Mediator of RNA polymerase II transcription subunit 12 from Arabidopsis with 65.63% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT4G00450) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428546.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |