Ll_transcript_494007

• Id Trinity: TRINITY_DN52867_c7_g1_i3
• Name Transcript: Ll_transcript_494007
• Sequence: AGCAGCTGCACGTCCTCTGAACTGGCAAAAGTACTGTTTGAGGCATGGAGATATTTTGTCCTTCCTGATGAATGGGGTATTTTATTTTGGAGAAGAGTCT GTTATTCAGACTCTTAAACTTCTTAATCTAGCCTTCTATACAGGAAAGGATAATAGTCACACTTCACAAAAAACAGATTCAGCAGATGTGATCTCAATCA AATCAAGTACCACACCTCAAGAGTCAAAGAAGAAAAAGAAGGGTGTAGATGGCTCTGAATCTGGTTCTGAGAAATCCTATTTGGATATGGAAGCACTCGT AGATATCTTCAGTGACAAGAATGGAGATGCCTTACAACAATTCATAGATTGTTTTCTTCTGGAGTGGAATTCAAGCACTGTGCGTGGAGAGGCCAAACTA GTCCTGTGTGGTGTCTGGCATCATGCTAAACCAGCATTCAAAGACACTATGTTAATGTCTCTCCTTGAAAAAGTTAAATTCCTCCCATTGTATGGTCAGA ATATTGTGGAGTATACTGAACTCGTGACGTGGTTGCTTGGAAAATCCCCTGATAGTGGCTCAAAACACCAGATTTATGAACTTGTGGGCCGATGCTTGAC GCCCGGTGTAATTAAGTGCATATTTGAGACACTCCATTCACAGAATGAGCTGTTAGCTAACCATCCAAATTCCTGCATCTATAATACTTTGAGTGGCGTA GTGGAATTTGATGGGTATTATCTTGAGAGTGAACCTTGTGTTGCCTGCAGCTCCCCTGAAGTACCTTACAGCAGGATGAAGTTCGAATCTCTAAAATCTG AGACAAAGTTCACTGATAACCGTATCATAGTGAAATGCACTGGGAGTTACACAATCCAGACTGTGACAATGAATGTTCATGATGCCAGGAAGTCAAAATC GGTGAAGGTTTTAAACCTATATTATAATAATCGGCCAGTTGCAGACTTATCAGAGTTGAAAAATAACTGGTCTTTGTGGAAGCGTGCAAAAAGTTGTCAT CTTGCTTTCAATCAGACTGAACTTAAAGTTGAATTTCCCATTCCCATTACTGCTTGCAACTTCATGATTGAACTAGATTCGTTCTATGAAAATCTTCAGG CATTGTCTCTAGAACCACTGCAATGCCCTCGTTGTAGTCGTCCTGTCACTGACAAGCATGGTATATGTAGCAATTGTCGTGAAAATGCATATCAGTGCAG GCAATGCCGCAACATTAATTATGAGAATTTAGATTCTTTTCTATGTAATGAATGTGGGTTCAGCAAATATGGGCGGTTTGAGTTTAATTTCATGGCAAAG CCAAGTTTTACGTTTGATAATATGGAGAATGATGAAGATATGAAGAGGGGACTGGCAGCTATTGAATTAGAGTCAGAAAATGCTCATAAGAGATATCAGC AACTTTTGGGCTTCAAAAAGCCCTTGCTTAAAATTGTATCCAGCATTGCTGAGAGTGAAATGGATTCACAGCAAAAGGATCCTGTGCAACAAATGATGGT TTCTTTACCTGGCCCGTCTTGTAAAATCAATCGCAAAATTGCCCTTCTTGGGGTCCTCTATGGTGAGAAGTGTAAAGCAGCTTTTGATTCTGTCAGCAAA AGTGTACAGACACTGCAAGGGCTGCGTAAGGTGTTGATGAATTATTTGCACATAAAGCATTCCGATAATAGTGTGGCTTCAAGATTTGTTGTTTCCAGGT CACCAAATAATTGCTATGGCTGTGCAACCATGTTTGTAACGCAATGTCTAGAACTATTACATGTGCTAGCTAGGCATCCAAATTCCAAAAAACAACTTGT TTCAGCTGGAATTTTGTCTGAATTATTTGAGAATAACATTCATCAAGGTCCTAAAGCTTCCCGTTTCCAAGCAAGGGCAGTCCTTTGTTCTTTATCTGAG GGTGATGTAAATGCAGTTACTGAGTTGAACAGTTTGCTACAAAAGAAAGTTATGTACTGCCTTGAGCATCACCGCTCCATGGATATTGCTGTGACTACAC ATGAGGATATGCTATTACTTTCTGATGTGTGTTTTTTGGCTGATGAATTCTGGGAATCAAGACTACGCATTGTATTTCAGTTGTTGTTTTCTTCCATTAA GTTAGGTGCAAAACATCCTGCTATCTCTGAGCATATCATTCTTCCTTGCCTTAGAATTGTATCTCAGGCATGTACACTTCCAAAACCCGATACACCAGAT AAAGAGGAAG
• Tissue: pods
• Gene name: LI_gene_196428;
• Additional information: details;

Expression of Ll_transcript_494007

FPKM

• PAB: 0
• PNAB: 1.7
• PS1: 1.6
• PS2: 1.2
• PS3: 1.7
• PW1: 1.2
• PW2: 1.6
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494007

• Blastp: Auxin transport protein BIG from Arabidopsis with 80.51% of identity
• Blastx: Auxin transport protein BIG from Arabidopsis with 80.51% of identity
• Eggnog: Ubiquitin protein ligase E3 component n-recognin 4(ENOG410XPP8)
• Kegg: Link to kegg annotations (AT3G02260)
• CantataDB: Link to cantataDB annotations (CNT0002836)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452981.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;