| Id Trinity | TRINITY_DN52867_c7_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_494008 |
| Sequence | GTTTTGTATATCACTTCAGTTACTCTGTCTCTCTCTAGAACTTTCTATGGCGGAGAATCTCATCAAACTCGCCGATGTTCTCTTCGCCGGCGCTACTCCC TCGCCGGAAGATCTTTTGCAGAAGCTTCGTTCCGATGACAACGTTAGATCAGCACTCAACGCTTTCTACTCCGTTCTCCGCCGCGGCCTCGAAGTCGACG GCGATATCCTCCGCCTTGAATCATGGAACCTCTCTCAGATTCAGGCGATTTCTTCGTTCTCTTATGCGATCGCTTTTGCTACTCGATCTTTGTCAGTGGA GCAAGCAGAAGGGATACTTGTTGCAATTGTGCAGCGATCAATAGAATTTGCTGTGTGCTATTTGGAGAAATCGGAGTTCGCTGGCGACGATCTAGGGATT CAGAACAATATGATACATCTTTTAGAGATAGCTTTGGTAGATGAAATGGATACGGTGGCAGACATGTTGCAACCAACATCTGCAAGTGCCTTGGTAGATA TGTTGCCTGTCGTTGATGCTTATTGTGGTAATTTTGTAGATGACTACACCAAATGCCATCTACAAGGTTTCAGATGCTCAAAGGAAGAGAAAACAGTGGA TTGGCTTCTGAAGACTTTAGATTCTGAACGTGTCCCACCTGATAGGCAAAGATCTGGATTTAATGCACTGACTTATTGCCAAAATCTCAAAAGATTTGTC TTTCTGTCCCAGCACTGGGCTGTTGTCCATGGACAGTGCACTCCTCGCTTGATCTTGCTGTGCAATAAACTTATTAATGAGAAGGCAGTGGGCCAAAGTT TTCGAATGAGGCTGTTGTTCACATTGAGGATGTTAAAATTACTCACAACTCTCACGAAGGATGTTCCTTATGTTGAATATGATGTTTCATTGGTGAGGGC AGTTGCCTCATATGCTGATGCTTTATCAAGTCTGTTTAGAGTTCAAATTGAGTTTGTGGATACCGATGCTACTATTGAAGGAAGTTTCGAGAGCGTTGTC TTAATGGTTGTGGAAGAGTTTCTTCATAATGTTCAGGTTATTTTTGGCAATAGCAGTGCTACCCAGAATATCCAAGCATCCATTATATCATCCATATTGG GGAGTTTGGAATCTTCTGTTTGGAGATATGATAAGTCATCTCTAAATTTGAATCCCCCTTTAGCTTACTTCCCTCGATTCGTTGAGAAAGCACTGAAGCT CATTAATGATCTAAAGAGGCAAAGGCATCAGGTTCCTCTTGAGTGGAAAGATTTTGGTTCACAGAATGATTCTCTGTCATGCCTCTTTCATATGGAGAGT GTTCCTCTGGGGAAGAGTTACACATCTGATGAGCTTCTGAAACTGATATTTCCTTCATCAAGCCAATGGATTGACAATTTGCTGCAACTTGCTTTATTCC TTTATTCTGAAGGTCTAAAATTAATGCCAAAAATGGAAAGGTCGCATTCTAGTTCTGCAAAAGTTACAGGCACATCTGATAATGAGAGTGCAATTTGCCA TGAGGATGAGGCTCTTTTTGGAGATCTTTTCTCTGAGACTGGACGTTCTGTTGCATGTACTGATGGATGTGAGCAACCACCTGCTGCTGCCTTGATTTCT AATTCCAGCTATCATAATATGCCAATCCAAGCTGCTATAGAACTTCTGAACTTCCTTAAAACATGCATCTTCTCTCCAGAATGGCATCCTTCTCTTTATG TGGATGGATGCAACAAGCTCAGCAGTAGACACATTGATATTTTGCTTTACCTACTCAACTGCCAAGGCTGTTGTTCTGAAGATAAAAGTTTTTCTCCACA TGAGGACATGAAGATTGGGCATATCCATGAACTATGTTATGATCTTTTTTACAACCTTCTCATGAACCATGCTTTGTCTGATTCACTTGAAGATTACCTT GTGGAGAAGATCCTAATAGTTGAGAATGGTGCCTTTTGTTATGATGATAGGACTTTGACCCTGCTTGCTCATACTTTGTTTTGTAGGGTGGGTTCTACTG GTAGTCAGTTGAGAACCAAGATTTATAGGGGATATGTTTCATTTGTTGTTGACATGGTGAAATCTGTTTGTACAAAATGTCCGAGTTTTAAAGATCTTGT TGGGACTCTTCCCTCGCTTTTTCACATCGAGGTAGTTCTTATAGCATTCCACCTGTCTGATGAAGCAGAAAAAGCAGTTATGGTAAACTTAATCTTTTCA ACCTTCAAAGAGGTTGCTAACCTGGCATTGGACTTGAACAACACGCAGTTAACATGCTGGGCTTTAGTGGTTTCGAGGCTGATCTTAGTTCTTCGTCATT TGATATTTCACCAACAAACTTGTCCAACACCATTGCTTTTAGATGTCCGATCTAAATTGAGGATTGTACCTCAGTCTGAATCATCAATGCCAAATAAGGT GAATGTTCACCTTTCATCATGGCCATCAACTGCATTGAAAAATCTTATGGGTGCATTGGTTGGAGAGGAAGTTGTCAGTAGCTTGACTGAACAACTGATT GATTTTTCAGGGTTTCCTGTTTCACTTGGTAGGGATGACTTGACAATCGATGGCTTAACTTCAGAGTGGGAGGACATTTATTTGACCTTTTCACTCGTTC TGGGACTCTGGAGGGGTAAAAGGGCCTCAACAGTGGTGGATCTCATTGTTGAAAGGTATTTTTTCACTCTTTGTTGGGATATCCCCTGTGTAGGCTCTGA AGAACATCAAATCATATCATGTAGTTGGGACCACCCTCTTGATCTATGTGACATGTTGCATTTTTCCTACTTCAGCCATTCACTTTTAGGCCATCAGCAA CTAATTGGGAAGTTCGCTACTTGTCCGGATACTGTGTTGAGCTTGCTTCAGCATTTAAGTGCTATGTCGATGCCTGAAGGAATTGAGGAAATTGGTTGGG ATTTCCTTAGAAGTGGAATGTGGCTATCTCTGATACTCTCCTTTACTAATACTGGAATATTGAAATATTTTATGGACAATGCAATTTCTGGACAAGGTCT TAACTGGACAGATAATTATTTTGGAGATCAGACATATGTTGAACTGGCTGGAAACATGATATCCTCAATGATTGACTCTGGTCAATTTCCATTATTAGTG AGGCTTTTTTCTTCCTTGCTGAACAAATATGTGCAGATTCATCAAAAAGCTTTCCTTGCTACCATTAGTTCCAGGCAAAATCAGGCTTCTGGGTTTTTAC CACTCTTGCTTCTAAAACATACTAGAATTGACAAATTCTTGCAGGGTGAGCTCCTGGAGAGGAGTAGTTCCAATGCAGGTGAGCTGGAGTCTTGTCTCAC CCTCTTATCAAGGTTCGATTCTGCTGTCGATAAAAAAGCTTCAGGAATTCTATCTAGGACCTCTTGGGAGTGCATGTATCATGGTTTTCCTTTTCATCTT TCCACTCCTAGTGCAACTATGTTTTCTTGTATAGTTAGCATTCGAGGACTTATCTTTGCTCTGGATGGATTTCTCAAAATAAATGAAGCAGGAGGAAATG TTGATATGGATGTTGAGGTCCTCAGAGAAATTCTGGATGCAGTAATGAATATCAAGTTTGATACAATCTTTGAAAATATTCATGTGAAATGTGACGCTAT CTACCACAGTTTGACTGCAGAACTTGAATGGTCAGACTATGGTAACTTAATTTTTGTAAAGCAAATGGAAAGTTTTCTAAGGGACATTAGTGCTGGAGGA GTTAGTGATGGCAGTATTCTTGAATGGATAATCTGCCAGGTAATGGAGATATTAAGCAGCCTTAAAAAGGACCCTTCAAAGTCTGTCATGCTAAACTTAT ATCTTGGTTTGGAAAGTGTGCCAGTTCAGATCAAAAAACTTTTCGAGTTGCATCATAGTGACTGTTTGTTTCTAATTGACTCGCTAGATACGTGCTGCTC GGAATCAGTGAATATCAAGGTTCTTGGTTTCTTTGTGGATCTTTTATCTGGAGAGCTATTTCCTGATCTCAAAAAGAAGATACAAAGGAAATTTCTTGAC AAAGATAGTAGTTGCATAGCTCAATGGTTGGAAAGGAGGATTTTAGGCACCATAGTGGATTCTTCTAGTGGGGTCAATTGTGCAAATGGGAGCTCCAGTT CTCTTAGGGAAACAACAATAAATTTTGTTCTGTGCCTTTTATCATCACCATCTGAGCAACAATCAAAAGAATTGCAAAATCATATGTTTGAATCTGCACT GTTAGCACTTGATACTGCTTTTTTGCTATTTGATATACATGTAGCAAGGTCATATTTTAATTTCATCGTTCAGATTTCAAGAGGAGAATCATTGATGAAA CAGCTTTTGACGAGGACTGTAATGTTGACGGAGAAGCTGGCAGGCAATGACAATCTGCTTCCAGGTCTCAAGTTTCTATTAATCTTTATTGAAACTGTCT TGAGTGATTGCGGATCTGGTATAGTTTCCTCACGAAGAACAACTAAGAAGTGTTCATCTGGAAATACTTCTGGGACTGTAGGACTTGTGGATGTTCGACC AGTTGGATCCATGAAGAATTCTGAGACATTTACTCTTTCTGCTAATCAAGAGGGATCAGTCTCTCTTGAATGTGATGCAACTTCTGTAGATGAGGATGAA GACGAGGATGATGCAACTTCTGATGGTGAGGTTGTTAGCATAGATAAGGATGATGAAGATGCTAACAGTGAAAGGTCCCTTGCCTCTAAAGTTTGCACAT TTACTTCTAGTGGCAGCAATTTCATGGAACAACATTGGTACTTTTGCTATACATGTGACCTGACCATATCAAAAGGCTGTTGCTCTGTCTGTGCAAAGGT TTGCCATCGGGGCCACCGTGTTGTCTACTCCCGCTCAAGTCGATTCTTTTGTGACTGTGGAGCTGGGGGTGTTAGGGGTAGTAACTGTCAATGCTTGAAA CCTCGGAAATTCATGGGAGGTAGCAGTGCACCTGTTCGTGGGACTAATACTTTCCAGCAATTTTTACCCTTCTCTGAAGACGGAGATCAGCTGCCAGATA GTGATTCTGATTTTGAAGAGGATATGAGTTCAGATGTAGATAACTTAGTCAGATTATCTATTCCAAAAGAATTTCAAGATGGGATTCTATTGTTATTGGA AGAGCTTGATATTGAGAATCGGGTGCTCCGTCTTTGCTCTTCTTTGATGCCATCTATAATTACCAGAAGAGCCTCTCACCATAATAAGCATAAAAAAATC GTTTTGGGTGAAGACAAGGTCATTTCTCATGGCGTTGACCTCTTACAACTGAAGAAAGCATATAAAAGTGGATCAATAGATTTAAAGATAAAGGTAGATT ATTCAAATGCCAAGGAGCTTAAATCACATTTAGCAAGTGGTAATCTTGTGAAGTCCTTGCTTACTGTTAGCATTCGAGGTCGACTTGCTATTGGTGAAGG TGATAAAGTTGCTATATTTGATGTTGGACAGTTAATTGGTCAGGCCACCATTACACCTGTGACAACTGACAAGACCAATATGAAGCCCCTTTCTAAAAAT GTTGTTCACTTTGAGATTGTACAACTTGCATTCAATCCTGTGGTCGAGAACTATCTTGTTGTAGCAGGCTATGAAGACTGCCAGGTCCTCACTTTGAATC CTCGTGGTGAAGTGATTGACCGCCTTGCCATTGACCTGGCTCTGCATGGCGCATATATTAGACGGGTGGATTGGCTTCCAGGCTCACAAGTACAGTTAAT GGTTGTCACTAATAGATTTGTCAAAATATATGACCTGTCCCTGGACAACATCAGTCCCTTGCATTACTTCACCTTGCCAGATGACCTGATTGTGGATGCC ACTCTTTATCCCGCTTCTCAGGGAAAAATGTTTCTTGTAATTCTTTCAGAAAACGGAAACTTATTCAGGTTAGAGCTGTCAGTCAATGGGAACTTTGGGG CTATACCATTGAAGGAAGTTATACAGTTTCAGGGGAAAGAAATTCACGCAAAGGGCTCATCATTGTACTTCTCTTCAACTTATAAGCTGCTATTCATGTC CTTTCAAGATGGTACCACATTGATAGGCCAGCTAACTTCTGATGCAGCCTCTCTAGTTGAGTTCTCTTCAGTATACGAGGAGCAAGATAGTAAGCTGTGG CCTGCTGGACTACATCATTGGACAGAGTTGCTAGTTGGAAGTGGATTATTTATTTGCTTATCAAGTGTGAAGTCAAATTCTCCACTTGCTGTGTCAATGG GGGAACATGAAATGTTTGCACAGAGCATGCGGCATTCGGTGGGTTCAACCTCACCTATAGTTGGCGTGACTGCATACAAACCACTATCAAAGGATAAAAT CCACTGTCTTGTGTTACATGATGACGGTAGCCTTCAAATATATTCCCATGCTCCTGTGGGTGTAGATGCTAGTGTTAGTGCAGCATCGGAGAAAGTTAAA AAATTGGGTTCTGGTATCCTCAATAAAGCATATGCCGGTACAAATCCTGAATTTCCTCTTGATTTCTTTGAGAAGACTATATGCATTACATCAGATGTGA AGCTAGGAGGTGACGCCATCAGAAACGGAGATTCTGAAGGTGCTAAGCAAAGATTGTTAAACGAGGATGGTTTTCTTGAAAGTCCTATCCCGACAGGTTT TAAGATATCTGTCATCAACTCCAACCCTGATATAGTCATGGTTGGTTTTCGAATTCATGTGGGTAATACATCTGCAAGTCACATACCTTCTAGTATTACT ACTTTCCAGAGAGTTATTAAGTTAGATGAAGGAATGAGGTCCTGGTATGATATTCCTTTTACTGTTGCTGAATCACTACTTGCTGATGAAGAATTTACAA TCACAGTTGGGCCACCTTTTAATGGCTCATCACTTCCCAGAGTAGACTCACTTGAAATTTATGGTCGAATTAAAGATGAATTTGGCTGGAAAGAAAAAAT AGACGCAGTCTTGGATACCGAAGCAGGAGTACTTGGTTCAAATTTATCACACACTGGATCTGGGAAGAAGCACCGATCAATGCGGTCTGCTTCTATTCAG GAGCAAGTAATAGCAGATGGGCTTCAGCTAATTACAAAGTTTTATTCATCATGTAGGCAATTTGTTTGCTCAAGTCTCGAGGAAGCAAGAATGAATCTGG GCAGACTCAAGTGTAAGCAACTACTAGAGGCAATATTTGAGAGTGACCAGGAACCAGTTTTGCAAGCTTCTGCATGTCATGTCTTACAGGCGGTTTTCTC CAAGAGAGAGATATATCATCAAGTTAAGGATATGATGCGGCTTCTTGGAGTGGTTAAGTCATCATCATTACTATTGTCAAGACTTGGTATTGGCGGTACA GTAGGGAGTTGGATTATTGATGAGTTTACTGCTCAGATGCGTGCAGTTTGTAAGATTGCATCGCAACGCCGTTCTAATTTTGCAACATTTCTGGAGACAA ATGGTTCAGAGGTGCTGGATTCACTCATGCAAGTTCTATGGGGAATTCTGGACTTCGGGAAGCCTGACACACAAACTATGAACAGCATTGTTATGTCTGC AGTTGAACTTATTTATTGCTATGCCGAATACTTGGCTTCACATGGCAAAGATGCAGGATTGCACTCTGTTGCTCCTGCTGTTGAATTACTCAAGAAACTT CTTTTTTCATCCAATGAAGCTGTTCAGACTGCTAGCAGTTTGGCCATATCTTCAATATTGCTTCAGGTCCCATTTCCAAAGCAGACTATGTTAGCTACAG ATGATGCTGTTGAGGGTGTAGTATCTATTCCTGCCCCTGCTGGCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_196429; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_494008
| Blastp | Auxin transport protein BIG from Arabidopsis with 53.22% of identity |
|---|---|
| Blastx | Auxin transport protein BIG from Arabidopsis with 52.84% of identity |
| Eggnog | Ubiquitin protein ligase E3 component n-recognin 4(ENOG410XPP8) |
| Kegg | Link to kegg annotations (AT3G02260) |
| CantataDB | Link to cantataDB annotations (CNT0002836) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452981.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |