| Id Trinity | TRINITY_DN52873_c3_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_492537 |
| Sequence | GTTGAGAGTGATTTTAGAAGCTCTTTATTTGTTGTGTGTCTCGAGAATGAGCTGGCCAAAGTTGACTGAGGAGTAGCCTTTAAGGACACGGCATTTGAAG GAAAGAGATCCAATGGTCCCTTATGAGTGTGGGAAACCGAAGAGTGTGGATTAAAAGATAAGGGGGAAACCACTTCTTCATTTGCATGGTCTCTCTCTTT TGAAACTCCACAACTATTTTCTACCCCATTTTCTTTGCTGAACCAGACCCCTTCCTCATTTTCTTTAGCTGTTTTTTTCTTTTGTACTCGTGAAACCTCC CTAGCTCCAGTGAGAAGGTATTCTTCTTCAATAGAAGCCCGTCCACTGTGTGCACCCCGAAGCATATTTCGCTGCTGTGATGTGCGCTCCTCTGCCTTGT TGTTGTCTTTTCTGTTTTTACCACCACATGGTGATATCCCTCCATGGTGTAACACTGTTCCAGCGTGCTCATCGCTAGTGTCTCCGGAGACCAAACGCGG TTCTGGAAGAGGAACATGGGTGGTTGTTGGATCTCCACAAAACCTTCGTAAAAGTGACACATGAAAGATGGGATGGACCCTTGCGGTGGCTGGTAACTCC AACTCGTAAGCTACTGGACCAATACATCGAAGGATCTTGTAAGGGCCAAAAAACCGTGGAGCTAGTTTATGACAAAGACGTCTCATAACCGTGACTTGAC GGTACGGTTGTAGCTTCAACAACACCCAATCGCCGACACTAAAGTGTAGTACCAACTGCACCTTCGGGAAGATGTCGGTTCAGAAAGGCGACCATGGTGG GAGGAGGTCGACCGTACAAGATCTCAAACGGAGAGTATCCTGTTGCGGAGTGCTTGGTCGTATTGTACCAATATTCCGCAATAGGGAGATGTTTGAACCA TTTGGTTGGGTTGGAACCCGTGAAGCATCTCAAGTATGTTTGCAAGCAGCGATTGATGACCTCGGTTTGTCCGTCTGATTGTGGGTGGTAGGCTGAGCTA AAGCAGAGTTGAGTTCCCAAGAGCCTAAAAAATTCTTTCCAAAATGTACTGAGAAATAGTCGATCCCGATCTGAAACGATTGATTTTGGAACACCATGAA GCCTCACAATATCTATCAGAAACCGGTGAGCTAATACTTGGGCCGTAAACTTTGTGGGTAACCCACTAAAGTGTGCGGACTTGGACAACCGATCTACCGC AACCCAGATCACCGTGTGACCATGCGATGACGGAAGTATGCTGCTGCCAACCGAGCCATAGTGGGCTTCAACCCTGAATGTCCCGCCACTGCTAAACTGT GATACTCTGTGAGGATGGTCTCTCTGAGTTGAGCCTAAGTTGATCTAGCAGCGTTGGAACCACGGTGGATAAGGAAGAGAATTCAGATCCAGCACTTTCG GAGAGTCGTGAGAGAGCATCCGCCACTCTATTTGAGGTACCCGTCCTATACTTGATTTCATATTGGAAACCAATTAATTTGGTGGCCCATTTCTGTTGTT CCGGGGTATGTAACCCTTGCGAGACCAAATGCTTTAAAATTTGTTGATCTGTTAGTATGGTGAACTTTCGCCCAATGAGATACTGACGCCATATTTTAAT TGCTTCTGTAACAACATACATTTCACGGAGGTAAGCAGAAGAGTGTTGCATCGAGGGACCATTTTCTTGCTGAAAAAGGTGATCGGATGTCCTGCTTGGG ATAACACAGCACCAATGGCGATGGCCGAGGCGTCTGTTTCAACTTCAAATGTAACAGCAAAATTGGGTAGATGTAGGACGGGGGTTTTTGTCATTGCTGC TTTTAATTCTGTAAAGGCCTGCTGAGCCTGTGATGTCCATGTAAACTTATTGTGCTTAAGTAGATCGGTAAGCGGAACGGCGAGAGAGGCGTAGTGTTTA ACAAACTTTCTGTAGAAGCCGGTGAGACCCAGAAAACCCCTGAGTGTCGTGAGAGATCGAGGTTGTGGCCAATCCACCATGACCTTAATTTTATCTGGAT CTGGTTGAACCCCTGCCGCTGATATAATATGCCCCAAATAGGAAACAGAAGCAACCCCAAACTGACACTTAGATAATTTGGCATAAAATTGATTAGAAGC CAATAATTGCAACACAATATCTAGATGGAGTAGATGATCTTTCAAACATTTACTATAAATCAAAATATCATAAAAAAAAACCAGAACGAACCGTGTAACG CCCCGAAAAATACATCTCAAAAACATTGCGGAAAATAGGTAAATTTTTTTTTTAAATGGTGACCTGAAAAATTGTCTCATTTTAAAACCATACTTTCCGG GACATCACTTTAAGTAACCAACTATCGCGGAATTCAATTCAGTTACTGCGAGGTAACTGACATTGGAACACAAATTCCTGAATAATATCATGCATAAATC AAAGGGATAAGTCATCAGTCAATACATGATAATGAATTCAAGGCGGAACTACATCGCCTATTCAAATACATAAAAATCCAAAAAAACTAAACTTCCCATC AAAATCAAAAGGGACCACCAATGCCCCTTATCGGATTCAGAAGATGCCAGGAATACTGGACCCTTCACTTGGGTCCTCTTCTTCCTCTGAATCCGACACG AGGTTAATCACCTCAACAGAACTCTCCACCTCGACGAGTTCAATCACTTCATCCTCTTCCTCATCGTCCAATTCCATGTCATGATGCCATATCCCCGAAG CATAGTTAGGGGGAGACGACAACCTCAGCTCAGGGGACTTCTTGCAAGACCCCGCTCCGCGACCATCGCTCCTGAATGCTCGGCTAGAGGAGGGAGCATC TACCACATCTGGCCACGTCCTGCGTCCTGCGGAAGGTCCAGCCACATCACTCTGGACCGGTGGGAAGCTAACACCAACTCCTGGAATCGGGTTCCTCCTT AGAGGTAAAGTGAATGAAGCATCAATTACGGCATCTGGATGAGGGATCATCATGGATGACCCGACGCACTCCATGTGCACCTTCAGGCCGCACGGACCTG AATAAGTATAGCGGTAGCCATCGCTATTCCATTGTCCCTCCGGGGACATGGTGAAGTGGTAGCCACGAATGTGAGTACTGTTGCGGTCCATCTGCTAAAA ACAAAATCAGAGTACAAGTACAAAACAAAAGAGAGAGTAAGACATCAAATGAATAAAATTCACCGACGGCGTGGACTTACTCCGAACATCACACTAAGAT ATGAAACATAGTTCGCATACAATCAACCTTATCAATTTCCATTTTCATTGTACATGCATCTATTGTATAACTCATATTTATCACGTCATACCATCTTTAT AATCATAATATGTTACATCATCATTATATAATCCATCAATAGAAACTCATAACAAATGCGTCATATCATAAAACAACATAAGTCATGTCCTCAACGATAA CATCCACATAATAGTACCATGATGATGCAGATGCTATAACCGTGGGAAACAACCTCCACAATGCAATGTATGCATGCTATGACATGATCATCCACCTTAC ACCAATCATCCTCCCAATGACCTAGTCGGAAATAATCGAGAGTACAGGCCCCATACCAAGCCTAATTGTACGCACCAAAAGCATTTCTCATAAAGTCGAT CGATCAATCTGTTCCAACGGAACTGTCCATACAGGACGGTGTCGTACAAACGCTTTCTGGGCATCCCTCTCATCGATCAATGATTACAACGAGGGGTTGT CAAAGATTATCTAGTTTGCGCTGTGAGAACTGTCCAATCCAACAGGATAAACTCTCTCAGGAATACACGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_196478; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_492537
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 39.81% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450597.1) |
| Pfam | - |
| Rfam | - |
| GO | - |