Ll_transcript_492538

• Id Trinity: TRINITY_DN52873_c3_g1_i7
• Name Transcript: Ll_transcript_492538
• Sequence: GTTGAGAGTGATTTTAGAAGCTCTTTATTTGTTGTGTGTCTCGAGAATGAGCTGGCCAAAGTTGACTGAGGAGTAGCCTTTAAGGACACGGCATTTGAAG GAAAGAGATCCAATGGTCCCTTATGAGTGTGGGAAACCGAAGAGTGTGGATTAAAAGATAAGGGGGAAACCACTTCTTCATTTGCATGGTCTCTCTCTTT TGAAACTCCACAACTATTTTCTACCCCATTTTCTTTGCTGAACCAGACCCCTTCCTCATTTTCTTTAGCTGTTTTTTTCTTTTGTACTCGTGAAACCTCC CTAGCTCCAGTGAGAAGGTATTCTTCTTCAATAGAAGCCCGTCCACTGTGTGCACCCCGAAGCATATTTCGCTGCTGTGATGTGCGCTCCTCTGCCTTGT TGTTGTCTTTTCTGTTTTTACCACCACATGGTGATATCCCTCCATGGTGTAACACTGTTCCAGCGTGCTCATCGCTAGTGTCTCCGGAGACCAAACGCGG TTCTGGAAGAGGAACATGGGTGGTTGTTGGATCTCCACAAAACCTTCGTAAAAGTGACACATGAAAGATGGGATGGACCCTTGCGGTGGCTGGTAACTCC AACTCGTAAGCTACTGGACCAATACATCGAAGGATCTTGTAAGGGCCAAAAAACCGTGGAGCTAGTTTATGACAAAGACGTCTCATAACCGTGACTTGAC GGTACGGTTGTAGCTTCAACAACACCCAATCGCCGACACTAAAGTGTAGTACCAACTGCACCTTCGGGAAGATGTCGGTTCAGAAAGGCGACCATGGTGG GAGGAGGTCGACCGTACAAGATCTCAAACGGAGAGTATCCTGTTGCGGAGTGCTTGGTCGTATTGTACCAATATTCCGCAATAGGGAGATGTTTGAACCA TTTGGTTGGGTTGGAACCCGTGAAGCATCTCAAGTATGTTTGCAAGCAGCGATTGATGACCTCGGTTTGTCCGTCTGATTGTGGGTGGTAGGCTGAGCTA AAGCAGAGTTGAGTTCCCAAGAGCCTAAAAAATTCTTTCCAAAATGTACTGAGAAATAGTCGATCCCGATCTGAAACGATTGATTTTGGAACACCATGAA GCCTCACAATATCTATCAGAAACCGGTGAGCTAATACTTGGGCCGTAAACTTTGTGGGTAACCCACTAAAGTGTGCGGACTTGGACAACCGATCTACCGC AACCCAGATCACCGTGTGACCATGCGATGACGGAAGGTGAGTAATAAAATCCATAGAAAGCTCTTCCCAAACTCTTTCTGGTATTTTTAAAGGATGTAAC ATCCCTTGTTGTTTGGCTGGTAAATATTTATTGTACTGACATGACATGCATTCTTGAATGAATTTTTTTGCATCGCGATACATTCCCGGCCAGTAGTATG CTGCTGCCAACCGAGCCATAGTGGGCTTCAACCCTGAATGTCCCGCCACTGCTAAACTGTGATACTCTGTGAGGATGGTCTCTCTGAGTTGAGCCTAAGT TGATCTAGCAGCGTTGGAACCACGGTGGATAAGGAAGAGAATTCAGATCCAGCACTTTCGGAGAGTCGTGAGAGAGCATCCGCCACTCTATTTGAGGTAC CCGTCCTATACTTGATTTCATATTGGAAACCAATTAATTTGGTGGCCCATTTCTGTTGTTCCGGGGTATGTAACCCTTGCGAGACCAAATGCTTTAAAAT TTGTTGATCTGTTAGTATGGTGAACTTTCGCCCAATGAGATACTGACGCCATATTTTAATTGCTTCTGTAACAACATACATTTCACGGAGGTAAGCAGAA GAGTGTTGCATCGAGGGACCATTTTCTTGCTGAAAAAGGTGATCGGATGTCCTGCTTGGGATAACACAGCACCAATGGCGATGGCCGAGGCGTCTGTTTC AACTTCAAATGTAACAGCAAAATTGGGTAGATGTAGGACGGGGGTTTTTGTCATTGCTGCTTTTAATTCTGTAAAGGCCTGCTGAGCCTGTGATGTCCAT GTAAACTTATTGTGCTTAAGTAGATCGGTAAGCGGAACGGCGAGAGAGGCGTAGTGTTTAACAAACTTTCTGTAGAAGCCGGTGAGACCCAGAAAACCCC TGAGTGTCGTGAGAGATCGAGGTTGTGGCCAATCCACCATGACCTTAATTTTATCTGGATCTGGTTGAACCCCTGCCGCTGATATAATATGCCCCAAATA GGAAACAGAAGCAACCCCAAACTGACACTTAGATAATTTGGCATAAAATTGATTAGAAGCCAATAATTGCAACACAATATCTAGATGGAGTAGATGATCT TTCAAACATTTACTATAAATCAAAATATCATAAAAAAAAACCAGAACGAACCGTGTAACGCCCCGAAAAATACATCTCAAAAACATTGCGGAAAATAGGT AAATTTTTTTTTTAAATGGTGACCTGAAAAATTGTCTCATTTTAAAACCATACTTTCCGGGACATCACTTTAAGTAACCAACTATCGCGGAATTCAATTC AGTTACTGCGAGGTAACTGACATTGGAACACAAATTCCTGAATAATATCATGCATAAATCAAAGGGATAAGTCATCAGTCAATACATGATAATGAATTCA AGGCGGAACTACATCGCCTATTCAAATACATAAAAATCCAAAAAAACTAAACTTCCCATCAAAATCAAAAGGGACCACCAATGCCCCTTATCGGATTCAG AAGATGCCAGGAATACTGGACCCTTCACTTGGGTCCTCTTCTTCCTCTGAATCCGACACGAGGTTAATCACCTCAACAGAACTCTCCACCTCGACGAGTT CAATCACTTCATCCTCTTCCTCATCGTCCAATTCCATGTCATGATGCCATATCCCCGAAGCATAGTTAGGGGGAGACGACAACCTCAGCTCAGGGGACTT CTTGCAAGACCCCGCTCCGCGACCATCGCTCCTGAATGCTCGGCTAGAGGAGGGAGCATCTACCACATCTGGCCACGTCCTGCGTCCTGCGGAAGGTCCA GCCACATCACTCTGGACCGGTGGGAAGCTAACACCAACTCCTGGAATCGGGTTCCTCCTTAGAGGTAAAGTGAATGAAGCATCAATTACGGCATCTGGAT GAGGGATCATCATGGATGACCCGACGCACTCCATGTGCACCTTCAGGCCGCACGGACCTGAATAAGTATAGCGGTAGCCATCGCTATTCCATTGTCCCTC CGGGGACATGGTGAAGTGGTAGCCACGAATGTGAGTACTGTTGCGGTCCATCTGCTAAAAACAAAATCAGAGTACAAGTACAAAACAAAAGAGAGAGTAA GACATCAAATGAATAAAATTCACCGACGGCGTGGACTTACTCCGAACATCACACTAAGATATGAAACATAGTTCGCATACAATCAACCTTATCAATTTCC ATTTTCATTGTACATGCATCTATTGTATAACTCATATTTATCACGTCATACCATCTTTATAATCATAATATGTTACATCATCATTATATAATCCATCAAT AGAAACTCATAACAAATGCGTCATATCATAAAACAACATAAGTCATGTCCTCAACGATAACATCCACATAATAGTACCATGATGATGCAGATGCTATAAC CGTGGGAAACAACCTCCACAATGCAATGTATGCATGCTATGACATGATCATCCACCTTACACCAATCATCCTCCCAATGACCTAGTCGGAAATAATCGAG AGTACAGGCCCCATACCAAGCCTAATTGTACGCACCAAAAGCATTTCTCATAAAGTCGATCGATCAATCTGTTCCAACGGAACTGTCCATACAGGACGGT GTCGTACAAACGCTTTCTGGGCATCCCTCTCATCGATCAATGATTACAACGAGGGGTTGTCAAAGATTATCTAGTTTGCGCTGTGAGAACTGTCCAATCC AACAGGATAAACTCTCTCAGGAATACACGGG
• Tissue: pods
• Gene name: LI_gene_196478;
• Additional information: -

Expression of Ll_transcript_492538

FPKM

• PAB: 3.7
• PNAB: 2.4
• PS1: 1.4
• PS2: 3.7
• PS3: 0.9
• PW1: 3
• PW2: 6.5
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_492538

• Blastp: -
• Blastx: Transposon Tf2-8 polyprotein from Schizosaccharomyces with 36.8% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423049.1)
• Pfam: -
• Rfam: -
• GO: -