Ll_transcript_494345

• Id Trinity: TRINITY_DN52875_c4_g1_i2
• Name Transcript: Ll_transcript_494345
• Sequence: TCAAATGCGTGGAATTATCATACAAAGCTGAGGCTGGTAGTGTCAGACTGCGGGAGGATATACACAATGCCCATGGATATCAATTCCTTGTCCAATTTGC ACTAACTCTGTCCAACATGACAAAAAGTCAGGGCTTTCAGTCCATTTGTTCCAATTCGTGTGATGACCAATATGTTACTACAGATAGGTCCCAAAATAGT AGAGAAAAGAATTCCAATGAACTAGAGAAGTCCTCCATCGAATACCTTTCACCTACACTCTCTAGGTTGCTAGATGTTCTTGTTAGTTTAGCTCAAACTG GACCTAATGAGTTTCTTTATAGTTATGGAGATAAGGGTTCCAAATCTTCTCAAAACAAGAAGGGCGGTCATGGTCATAGAAGAAGCAGAAGTCGTACATT ATCTTCTGATTGGCTTGGTGATGAGTTATGGGAGAAGAACAATGGTAAAATTATGGACCTTGAAGCAGTCCAGATGTTACAAGATATTCTACTCAAAGCT AATAGCCAGGAGTTGCAGGCTGAAGTATTGAATAGACTGTTTAAAATATTTTCTGGTCACCTAGAGAACTATAAGCTGTGTCAGCAATTACGAACTGTTC CACTTTTAATCCTAAACATGGGTGGTTTTCCTTCTCCTTTGCAAGAGATAATCTTGAAAATCCTTGAATATGCCGTGACTGTTGTAAATTGTGTTCCTGA GCAAGAGTTACTTTCACTTTGCTGCTTACTGCAGCAACCAATAACATCAGGGTTGAAGCAGACAATACTTTCTTTCTTTGTAAAACTCTTGTCCTTCGAC CAACAGTACAAGAAAGTTCTGCGTGAAGTTGGTGTTTTGGAAGTTATGTTAGATGATCTGAGGCAACACAGGATTTTGGCTCCTGATCAACCGAATGTTA ATTCCAACCAGCTAGAGAGGAAAGATAGCTCTAGCAATTTCAAGAAACATCTGGGCAAGGATGTTATTATTACTTCACCGAAGTTCATGGAATCTGGTTC TGAGAAGTTCCCTATTTTTGAAGTTGAAGCTACAATTTCTGTGGCTTGGGAGTGCATGCTATCTTTATTGAAAAAAGCCGAGGGTAATCAAACTTCATTC CGCTCTGCTAATGGTGTGACTGCTGTATTGCCTTTTCTGGTGTCTGATGTACATCGTCAAGGGGTCCTCAGGATATTGTCCTGTCTTATAATTGAAGATG CTTCACAGGCTCATCCTGAAGAATTAGGTGTGTTGGTTGAAATTTTGAAAAGTGGAATGGTGAGCAGTACTTTGGGATCCCACTACCGGCTTTCCATTGA TGCAAAATGTGACACTATGGGAGCGCTGTGGCGGATTTTGGGAGTGAACAACTCTGCGCAGAAGGTTTTTGGTGAAGCTACTGGTTTTTCTCTTTTGCTT ACTACACTCCATGGATTCCAAAGTGATGCTGGGGACTTTGACCAATCTTCATTGAACTTATATGTTAAGGTGTTTACATATTTGTTGCGTGTTGTAACTG TTGGAGTGTTCGACAATGCTGTAAATAGAATGAAGTTGCATGCAATTATATCTTCACAGACTTTCTTTGATCTTCTATGTGAGTCTGGCTTACTTTGTGT AGAGCATGAAAAACAAGTTATCCAGTTGATGTTGGAACTTGCCCTTGAAATAGTGATTCCACCTTTCTTAGCATCAGAGGGTTTGACACAATCAGATGCA ATTGAAAATGAGTCATTCCATAATCTTCTATTGACTCCATCAGGTCCAATCAATCCTGATAAAGAGCGAGTCTACAATGCTGGTGCCATTAGAGTTTTGA TTCGTGCATTATTGCTGTTTACTCCTATGGTGCAGTTAAAACTTCTAGACTTAATTGACAAGCTGGCTCGTGCTGGTCCCTTCAATCAGGAAAACCTCAC TTCTATAGGTTGTGTCGAACTTTTGCTAGAGACAATCCATCCTTTTCTTATGAGTTCGTCTCCACTGCTTTCTCATGCGTTAAAGATTGTGGAAGCCCTT GGTTCTTACAGGCTATCTGCATCTGAACTTCGTATGCTCATCAGATATGTTCTTCAAATGAGGCTGAAAAATTCAGGACGTATAATTGTTGAGCTGATGG AAAAATTAATTCTTATGGAAGATATGGCCTCAGAAAACATCTCTCTTGCACCGTTTGTGGAGATGGATATGAGCAAGATTGGGCATGCTGCCATTCAGGT TTCCTTGGGTGAAAGGTCATGGCCCCCAGCTGCTGGTTATTCATTTGTTTGTTGGTTTCAGTTTCAAAATTTTTTGAAATCACATTCAAAAGAGACTGAA CCTTCAAAATTTGTACCATCCAAGAAGCGGTCTGGCACAAATGGACTGCATGAGCAGCATATCTTAAGAATTTTTTCGGTTGGTGCTACTAATGATGATA ATGCAAACTATGCTGAACTTTATCTCCAGGAGGATGGTGTTCTGACTCTTGCAACAAGTAACTCTTCCTTCTTATCGTTTCCGGGTTTAGAGCTTGAAGA AGGGAGGTGGCATCACCTTGCTGTCATTCACAGTAAACCAAACGCTCTTGCTGGGCTGTTTCAAGCTAGTGTTGCATATGTTTATTTGAATGGAAAGCTA AGGCATACTGGGAAATTAGGATATTCACCATCCCCGGTAGGTAGACCATTGCAGGTCACTATAGGGACATCAGTTGGAAATGCCAGAGTTAGTGACTTGA AGTGGAAACTTCGCTCATGCTATCTTTTTGAGGAAGTGCTTACACCGGGATGTATATGTTTTATGTACATACTTGGTAGAGGGTACAGAGGCCTCCTCCA GGACACAGATCTTCTGAAATTTGTACCTAACCAGGCCTGTGGAGGTGGTAGTATGGCTATATTAGATTCTTTAGATGCTGATTTGACTTTGGCTGCTAGT GGGCAGAGACTAGATTCTAGCAGCAAGCAGGGAGATCTAAAGGCAGATGGGAGTGGAATTGTCTGGGATTTGGAGAGACTGGGAAACCTTTCTTTGCAAC TATCAGGAAAGAAACTTATTTTTGCTTTTGATGGAACTTCTACAGAATTAGTTCGATCATCTAGTAGTTTTTCGATGCTCAATCTGGTTGATCCTATGTC AGCTGCTGCTTCTCCTATTGGAGGTATTCCCCGCTTTGGACGCCTCTCTGGAGATATTTATATCTGTAAGCA
• Tissue: pods
• Gene name: LI_gene_196486;
• Additional information: details;

Expression of Ll_transcript_494345

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.5
• PS2: 0.3
• PS3: 0.4
• PW1: 0.3
• PW2: 0.8
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494345

• Blastp: Protein SPIRRIG from Arabidopsis with 70.58% of identity
• Blastx: Protein SPIRRIG from Arabidopsis with 68.93% of identity
• Eggnog: beige BEACH domain containing protein(ENOG410XNQC)
• Kegg: Link to kegg annotations (AT1G03060)
• CantataDB: Link to cantataDB annotations (CNT0002534)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441894.1)
• Pfam: Concanavalin A-like lectin/glucanases superfamily (PF13385.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;