| Id Trinity | TRINITY_DN52875_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_494351 |
| Sequence | TCATCATTCAACTAATTATTTTCACACAAAACAAAGGGAGAGAGAGAGAGAGAGAGAGAAAGTGAAGAAATCGTGAATCGATCTCGTAGATCTTGGTGGC GGAGGAGTTTGATCGGCATTTTGATCGGATCTGATGAACGGTGGTGATGATGATTAGTGTATGAGAGCGTTGTTGTTCGTATTATGTTTCAGAGAAGATC GAAGGAGGGGAAAACAATGAAATGGGTAACATTGCTTAAGGATTTCAAAGAGAAGGTTGGTCTTACTCAATCGCCTTCTCCTTCTCCTCCTCCTTCTTCT TCTCACGATAACAATGCCTTTTCAGCTTCGCAAACTTCTTCTTCGTCTCTTACCAGGGACAGACATGAACTGGAATTGGACTTCAAGAGATTTTGGGAAG AGTTTCGCTCATCCAGCTCTGAGAAGGAAAAGGAAGCAGCATTGAATTTGAGTATAGATGCCTTTTGTAGATTAGTAAAGCAGCAAGCTAATGTAGCTCA ATTAGTTACCATGTTAGTTGAAACACACATATTCTCTTTTGTTGTGGGAAGAGCATTTGTGACAGATATAGACAAGTTAAAGATAAGCAGCAAAACAAGA TCTCTGGATGTTGCTCAAGTCTTAAAGTTTTTCTCTGAAGTCACAAAGGACGGGATCAGCCCAGGAGCAAATTTATTAGCTTCAGTGGAAATTCTTGTTT CTGGGCCCATCGACAAGCAATCTCTACTTGACTCTGGGATATTTTGCTGTCTCATTCATGTTCTCTATGCCCTTCTAGACCCCGATGTAACCATTCAACG GCCAAATGCTGATGTTGATCTTGAAGAACAGTCTGTGTTGCAAAAACATTACAATGGTGATGTTGAGCAAGACCGCCGGCTTGAGGTAGAGGGAAGTGTT GTGCATATCATGAAAGCACTAGCAAGCCATCCATCAGCAGCACAAAGTTTAGCAGAGGATGATTCACTTCAGTTGCTTTTTCAAATGGTTGCCAAGGGTT CTCTGATTGTTTTCTCTCGTTATAAGGATGGACTTGTTCCATTGCACAGTATACAACTTCATAGGCATGCTATGCAGATACTTGTTCTCCTTTTGGTCAA TGACAATGGAAGCACAGCCAAATATATCCGTAAACATCATCTGATAAAAGTTCTTTTAATGTCGGTGAAAGATTTTGATCCCGATTGTGGAGATTCTGCC TATACTGTAGGCATTGTTGACTTGTTACTCAAATGTGTGGAATTGTCCTATAAACCTGAGGCTGGTAGTGTCAGACTGCGAGAGGATATACATAATGCCC ATGGTTATCAATTCCTTGTTCAGTTTGCACTAACTCTGTCCAACATGACCAAAAGTCAGGGCTTTCAGTCTATTTCTTCCAATTTGTGTGATGATCAAGA TATTGCTTCAGATAGGTCCCAAAATAGCAAAGAACAAAATTCCAACAAACAAGAGAAGTCCTCCATTCAATATCTTTCACCTACACTATCTAGGATGCTT GATGTTCTTGTTAGTCTAGCTCAAACTGGACTTAATGAACCTCTTCATGCATATGGAGGTAAGGGTTCCAAATCTTCTCAAAACAAGAATGGTGGTCATG GTCATAGCAGAAGCAGAAGTCGTACATCATCTTCTGATTGGATTGGTGATGAATTATGGGCAAATGACAATGATAAAATTAAGGACCTTGAAGCAGTCCA GATGTTACAAGATATTCTTCTCAAAGCTAACAGCCAGGAGCTGCAGGCCGAAGTATTGAATAGACTGTTTAAAATATTTTCTGGTCACCTAGAGAACTAT AAGCTGTGTCAGCAATTACGAACTGTTCCACTTTTAATCCTAAACATGGGTGGTTTTCCTTCTCCTTTGCAAGAGATAATCTTGAAAATCCTTGAATATG CCGTGACTGTTGTAAATTGTGTTCCTGAGCAAGAGTTACTTTCACTTTGCTGCTTACTGCAGCAACCAATAACATCAGGGTTGAAGCAGACAATACTTTC TTTCTTTGTAAAACTCTTGTCCTTCGACCAACAGTACAAGAAAGTTCTGCGTGAAGTTGGTGTTTTGGAAGTTATGTTAGATGATCTGAGGCAACACAGG ATTTTGGCTCCTGATCAACCGAATGTTAATTCCAACCAGCTAGAGAGGAAAGATAGCTCTAGCAATTTCAAGAAACATCTGGGCAAGGATGTTATTATTA CTTCACCGAAGTTCATGGAATCTGGTTCTGAGAAGTTCCCTATTTTTGAAGTTGAAGCTACAATTTCTGTGGCTTGGGAGTGCATGCTATCTTTATTGAA AAAAGCCGAGGGTAATCAAACTTCATTCCGCTCTGCTAATGGTGTGACTGCTGTATTGCCTTTTCTGGTGTCTGATGTACATCGTCAAGGGGTCCTCAGG ATATTGTCCTGTCTTATAATTGAAGATGCTTCACAGGCTCATCCTGAAGAATTAGGTGTGTTGGTTGAAATTTTGAAAAGTGGAATGGTGAGCAGTACTT TGGGATCCCACTACCGGCTTTCCATTGATGCAAAATGTGACACTATGGGAGCGCTGTGGCGGATTTTGGGAGTGAACAACTCTGCGCAGAAGGTTTTTGG TGAAGCTACTGGTTTTTCTCTTTTGCTTACTACACTCCATGGATTCCAAAGTGATGCTGGGGACTTTGACCAATCTTCATTGAACTTATATGTTAAGGTG TTTACATATTTGTTGCGTGTTGTAACTGTTGGAGTGTTCGACAATGCTGTAAATAGAATGAAGTTGCATGCAATTATATCTTCACAGACTTTCTTTGATC TTCTATGTGAGTCTGGCTTACTTTGTGTAGAGCATGAAAAACAAGTTATCCAGTTGATGTTGGAACTTGCCCTTGAAATAGTGATTCCACCTTTCTTAGC ATCAGAGGGTTTGACACAATCAGATGCAATTGAAAATGAGTCATTCCATAATCTTCTATTGACTCCATCAGGTCCAATCAATCCTGATAAAGAGCGAGTC TACAATGCTGGTGCCATTAGAGTTTTGATTCGTGCATTATTGCTGTTTACTCCTATGGTGCAGTTAAAACTTCTAGACTTAATTGACAAGCTGGCTCGTG CTGGTCCCTTCAATCAGGAAAACCTCACTTCTATAGGTTGTGTCGAACTTTTGCTAGAGACAATCCATCCTTTTCTTATGAGTTCGTCTCCACTGCTTTC TCATGCGTTAAAGATTGTGGAAGCCCTTGGTTCTTACAGGCTATCTGCATCTGAACTTCGTATGCTCATCAGATATGTTCTTCAAATGAGGCTGAAAAAT TCAGGACGTATAATTGTTGAGCTGATGGAAAAATTAATTCTTATGGAAGATATGGCCTCAGAAAACATCTCTCTTGCACCGTTTGTGGAGATGGATATGA GCAAGATTGGGCATGCTGCCATTCAGGTTTCCTTGGGTGAAAGGTCATGGCCCCCAGCTGCTGGTTATTCATTTGTTTGTTGGTTTCAGTTTCAAAATTT TTTGAAATCACATTCAAAAGAGACTGAACCTTCAAAATTTGTACCATCCAAGAAGCGGTCTGGCACAAATGGACTGCATGAGCAGCATATCTTAAGAATT TTTTCGGTTGGTGCTACTAATGATGATAATGCAAACTATGCTGAACTTTATCTCCAGGAGGATGGTGTTCTGACTCTTGCAACAAGTAACTCTTCCTTCT TATCGTTTCCGGGTTTAGAGCTTGAAGAAGGGAGGTGGCATCACCTTGCTGTCATTCACAGTAAACCAAACGCTCTTGCTGGGCTGTTTCAAGCTAGTGT TGCATATGTTTATTTGAATGGAAAGCTAAGGCATACTGGGAAATTAGGATATTCACCATCCCCGGTAGGTAGACCATTGCAGGTCACTATAGGGACATCA GTTGGAAATGCCAGAGTTAGTGACTTGAAGTGGAAACTTCGCTCATGCTATCTTTTTGAGGAAGTGCTTACACCGGGATGTATATGTTTTATGTACATAC TTGGTAGAGGGTACAGAGGCCTCCTCCAGGACACAGATCTTCTGAAATTTGTACCTAACCAGGCCTGTGGAGGTGGTAGTATGGCTATATTAGATTCTTT AGATGCTGATTTGACTTTGGCTGCTAGTGGGCAGAGACTAGATTCTAGCAGCAAGCAGGGAGATCTAAAGGCAGATGGGAGTGGAATTGTCTGGGATTTG GAGAGACTGGGAAACCTTTCTTTGCAACTATCAGGAAAGAAACTTATTTTTGCTTTTGATGGTCCTTCCACAGAATTTGTTCCATCTTCTAGTAGTTTTT CAATGCTCAATCTGGTTGATCCCATGTCAGCTGCTGCTTCTCCTATTGGAGGTATTCCCCGTTTTGGACGTCTCTGGGGAGATATTTATATCTGTAAGCA AGGTATGATTGGAGAGACTATCCGTACTATTGGCGGGATGGAACTTGTCCTTGCACTTGTTGAAGCTGCAGAAACTAGGGACATGCTGCATATGGCACTT ACTCTTCTTGCCTGTGTGCTTCATCAAAATCCTCAGAATCTTAAGGACATGCAAACATATAGGGGCTACCATCTGCTTGCTCTTTTTCTGCGTCGCAGAA TGTCATTATTTGACATGCAGTCTCTTGAGATCTTCTTCCAGATTGCTGCTTGTGAAGCTTCATTTTCTGAACCAAAGAAGTTGGAAACTACTTTGTCTCC TGCCGTGTCCCTGCAGGAAACCAGCCTTGAGGATCAGTATTTGTCAAAGTTTCATGATGATAATTCTTCTGTTGGATCTCATGGAGACATGGATGATTTT TCTGCCCAAAAGGATTCATTTAGTCACATTTCAGAGCTGGAAAATACTGATATTGCTGCTGAAACTTCAAATTGCGTTGTATTGTCAAATGCAGACATGG TTGAACATGTCTTGTTGGATTGGACACTGTGGGTAACAGCTCCAGTTTCAATCCAAATTTCATTACTTGGGTTTCTTGAGAATTTAGTGTCAATGCATTG GTACAGAAATCATAATCTCACAGTTTTGCGGAGAATTAACCTTGTTCAACATTTACTAGTGACTTTGCAACGGGGTGATGTTGAAGTTCCCGTCCTTGAA AAATTGGTTGTATTGCTTGGGGTCATTTTGGAAGACGGTTTTCTATCTTCTGAGCTTGAAAATGTTGTTAGATTTGTGATTATGACTTTTGATCCACAAG GGTTGACCCCACAGCGTCCAATTATGAGAGAGTCAATGGGGAAACATGTAATTGTTAGAAATATGTTACTAGAGATGCTTATCGATCTACAAGTCACTAT AAAATCAGAAGAGTTGCTTGAGCAGTGGCATAAAGTTGTTTCGTCTAAGTTAATTACTTATTTTCTTGATGAAGCAGTTCATCCCACCAGTATGAGATGG ATCATGACTCTACTTGGTGTGTGTATTACTTCCTCTCCGACATTTGCACTTAAATTTCGCACCAGTGGAGGTTATCAAGGTTTAGTTCGTGTGCTCCCAA GTTTGTATGATTCCCCAGACATTTATTATATTTTATTCTGTTTGATATTTGGCAAGCCAGTTTATCCTAGGTTACCAGAGGTCCGCATGTTGGACTTTCA TGCCCTTATGCCAGGTGATGGAAGTTATACCGAACTAAGGTTCGTAGAATTGTTGGAATCTGTTATTGCTATGGCAAAAACTACTTTCGATAGAGTCAGC ATGCAATCAATGCTTGCCCACCAAACTGGTAATCTTTCTCGGGTTGGTGCAAGCCTTGTGGCTGAGCTTGTTGAAGGAAATTCAGACTTGGCTGGTGATC TTCAGGGGGAAGCTCTGATGCACAAGACATATGCTGCTCGTCTTATGGGTGGAGAGGCATCAGCCCCTGCTGCTGCAACTTCAGTTCTTAGATTTATGGT TGATCTGGCTAAGATGTGTCCCACTTTTACTGCTGTTTGCCGACGAGCAGAATTTCTTGAAAGCTGCATTGACCTATATTTTTCTTGCGTGAGGGCTGCA CATGCTGTTAAAATGGCTAAGGATCTCTCGGCAGTGGTGGAAGAGAAAACCTTGAATGATGGTGATGATACTTGTAGTTCCCAAAATACATTTTCTAGCT TGCCTCTTTATCAGGATCAGTCTGTCAAAACCTCTATTAGCATTGGAAGTTTTCCTCAAGGACAATTAAGTACAAGTTCTGATGATATGGCTGCACCAGC TAACTCTATGGCTGGTGAGAGATTACCAAATAATGTTCCTGTATCTGAGCTGGAATCAAATAAATATGTCCAGGAAGATTTACAAACTGTTCAGAGCTTT GATGGTGATAACGCTGATAAAGGCTCTGCCACTTCCAGTGCAGTCGAGTTCAGTTTTCATGGAATCAAAGGCGCTTCAGAGGTTCTCCCACCTACAGATT CTCAAAGTTCTGCATCCTTTGCCATACTGGACTCTCCTGATTTTTCAGAAAAGTCTAGTTCTAGAATTCCCCTCCCCCCTTCTTCATCGCCAGTCGTTGC ACTGACATCTTGGCTGGGAAGTGCAAACCACAACGAAGCAAAATCCACCTTAACACCAACTCCTTCTTTTGATTCTTCGATGTCTATTGGGGAGTTCGAT CAATCTTCAGACCTGAAGTCTACTTCTCAAGGTCCATCTGCCACAAATGCATACTTTTCTGTAACATCAAAGCTGCTTTTGGATATAGATGATTCTGGAT ATGGTGGTGGTCCATGTTCTGCAGGAGCTACTGCTGTGTTAGATTTCATTGCAGAAGTCCTTTCTGATTTTGTGACCGAGCAGGTGAAAGCATCACAGGT CATAGAGAATATCTTGGAAAGTGTTCCTCTATATGTTGATGGTGAAGCTTTGCTAGTTTTCCAGGGCCTGTGTCTTAGTAGATTTATAAACTTTCTTGAA AGACGACTGATACGTGATGATGAAGAAGATGAGAAAAAATTGGATAAGATTCGGTGGTCCTCAAATTTGGATGCTTTGTGCTGGATGATAGTGGATCGTG TATACATGGGTGCTTTTCCTCAGCCCTCAGTGGTACTGAAAACACTTGAATTCTTCTTATCAATGTTGCAATTGGCAAACAAAGATGGTAAAATTGAAGA AGCTGCTCCTGGTGGGAAGAGACTGTTATCAATTTCAATAGGAAATAAGCAACTTGAGGCTTATATTCATTCAATTCTTAAAAACACCAATAGAATGATT TTATATTGTTTCCTCCCATCATTTTTAGCAAGTATAGGGGAAGAGGATCTTCTTTCAGCGTTGGGTTTGCTCATTGAATCTAAAAAGAGATTATCTTCAA CTTCCTGTCCAGATGATTCAGGAATTGACATATGCACATTCCTCCAATTATTGGTTGCTCATAAAAGAATTATATTCTGCTCCAGCAATAGTGATACAGA TCTTAATTGCTGTCTGTGTGTTAATCTGATACCCCTTATCTGTGATAAAAGACAGGTTGTACAGAATATTGCCATTGATGTGATCAAGTATCTTCTGTTA CATAGGAGGGCTGCCTTAGAAGACTTGCTTGTTTCTAAGCCTAAACAAGGGCAGAAACTTGATGTACTTCGTGGTGGTTTTGATAAATTGTTGACTACAA GTTTATCTGATTTTTTTGAGTGGTATCAGAATACTGAACAAACTGTTAACAAAGTATTGGAACTGCGTGCTGGCATTATGTGGGGGCAATATGTTGCTGG ATCTGCGAAGTTTCCAGGAGTAAGAATCAAAGGCATGGAAGCACGGCGTAAGAAGGAAGTGGGGAAAAAATCTCGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_196486; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_494351
| Blastp | Protein SPIRRIG from Arabidopsis with 70.58% of identity |
|---|---|
| Blastx | Protein SPIRRIG from Arabidopsis with 70.11% of identity |
| Eggnog | beige BEACH domain containing protein(ENOG410XNQC) |
| Kegg | Link to kegg annotations (AT1G03060) |
| CantataDB | Link to cantataDB annotations (CNT0002534) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441894.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |