| Id Trinity | TRINITY_DN52880_c0_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_493337 |
| Sequence | CAGAGGATATTCCTGGATTACCTCCGATAAGGGAGATAGAGTTTGCTATCGATCTAGTTCCTGGAACTGGACCGATCTCTATTGCTCCTTATAGGATGGC GCCATTGGAGCTGGCGGAACTGAAGAAACAGTTGGAAGGTTTGTTGGAGAAGCAATTCGTCAGACCAAGTGTTTCGCCTTGGGGTGCGCCAGTTTTGTTT GTGAAGAAGAAAGATGGCAGTACGCGTTTGTGCACGGACTATAGACAGCTCAACAAAGTGACCATCAAGAACAAGTACCCGTTGCCTAGGATTGACGATT TGATGGATCAACTAAGAGGAGCGACGGTGTTTTCAAAGATCGATCTTCGATCAGGGTACCATCAGATACGTGTAAAGGCGGAGGATATTCCGAAGACTGC TTTTCGGACGCGTTACGGACATTACGAATATCTCGTGATGCCCTTTGGTGTAACTAACGCGCCCGCAATATTCATGGATTACATGAACAGAATATTTCAT CCGTACCTCGACACGTTTGTCGTTGTATTTATCGATGATATTCTGATTTATTCGAAGAATAAAGAAGAACATGCCGAGCATCTGCGTGTGGTGTTGCAGA TTTTGAAGGATAATCAGCTCTATGCTAAACTTTCGAAATGTGAGTTTTGGCTAGAGTCAGTTAATTTTCTCGGTCATGTGATCTCAAAAGGAGGAATTGC AGTGGATCCGGCAAAGGTAGAGACGGTAATGGACTGGAATTCTCCGAAGTCCGTGACGGAGATTAGAAGCTTTTTGGGATTAGCGGGCTACTATCGCAAA TTTATTGAAGGATTCTCTAAGTTAGCATTGCCTTTGAAAATGTTGACAAGGAAAGACAAGGCGTTTGTATGGACAGCTAAGTGCGAAGAAAACTTTCAGG AGTTAAAGAAAAGATTGACGACCGCACCAGTGTTGATTCTGCCAGATCCTAGTGTGAACTATAATGTGTACTGTGATGCATCTAAGCAGGGTTTGGGATG TGTGTTGATGCAGCAAGGAAAGGTGGTAGCTTATGCATCCAGACAGCTAAAGACTCATGAGCAGAACTACCCGACGCACGATCTGGAGTTAGCGGCGATC GTGTATGCACTCAAAGTATGGAGACATCATCTGTATGGTGTAAGATTTGAAGTGTTCAGCGATCATAAAAGTTTGAAATATCTGTTTGATCAGAAAGAAC TGAACATGAGGCAAAGACGATGGATGGAATTCTTGAAGGATTATGACTTTGACTTGCAGTACCACCCGGGAAAGGCTAATGTGGTGGCTGATGCCTTGAG CAGGAAGTCGTTACATCTCGCAACATTGATGATCAGTGAGCTGAGGCTGATAGAAGAGTTCAGGGATATGAATCTAGCAGTACAAGTTGGACCCAAGAGC TTGATTTGTGGAATGCTCACCGTAAGGAGTGATTTCATGAATCAGTTGAAAGGGTTACAAGATGTTGACCCAGAGCTTCAGGAGAAGAGAAAATTTTTAG AGGAAGGAAAAGCCCCAGAATTTCAGATTGGAAATGGTGGTGTACTCAAGTGTAAGGATAGAGTCTGTGTGCCAAAAGATTCTGATTTGAGGAAATCAAT TTTGGATGAAGCACACAAGAGCAAGTTAAGCATTCATCCCGGTGCTACCAAAATGTACCAAGATTTAAAGAAAATGTTTTGGTGGTCGGGTATGAAGAAG GATGTAGCAGAGTATGTCTCTCGGTGCCTGGTGTGTCAGAAAGCCAAGATTGAGCACCAGCGACCAGGGGGAGAACTCCAACCATTGGATATTCCGGTTT GGAAATGGGATAGCATCTCGATGGACTTCGTGAGTGGATTTCCAAAGACTCAGAAAGGCTTTGATGCCGTTTGGGTTATAGTGGATCGTCTGTCGAAGGT AGCTCATTTTCTACCCATTAATATGAAGTACTCTTTGGAGAGATTGGCAGAGATTTATATCAAAGAGATTGTCAGACTGCACGGTATTCCCGTAAGCATC ATCTCGGATAGGGATCCGCGTTTCACTTCTAAAATCTGGAATGGTTTGCAAGCGGCTCTAGGAACTAAGTTGAAGATGAGTTCTGCTTATCATCCGCAGA CTGATGGTCAATCAGAAAGAACGATTCAATCGTTAGAAGATCTCTTAAGAGCATGTGTGCTGGATAATGCAGGAAATTGGGCTGATTTTCTGCATCTGAT TGAGTTCACCTATAACAACAGTTTTCATTCTAGCATCGGTATGGCACCGTATGAAGCTTTGTATGGCCGGAAGTGCAGAACCCCGTTGTGTTGGTTTGAA ACGGGAGAGAATTTAATGTTGGGACCCGATGTGGTCCAGCAGACGACGGAAAAGATTCGATCGATCAGGGAGCACATGAAGACGGCTCAGAGTAGGCAAA AGAGTTATTACGACAAGCGGAGGAACCCTCTCAGTTTTGAAGAAGGTGATCATGTATTCATGAGGGTGGTTCCGACGACTGGTATTGGCAGGTTACTTAA GGCCCGAAAACTTACCCCAAAAGCTTACCAAATAGCCTTACCGCCTTTGTTGTCCAATCTGCACAATGTTTTCCATGTGTCTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_196526; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_493337
| Blastp | Transposon Tf2-9 polyprotein from Schizosaccharomyces with 33.26% of identity |
|---|---|
| Blastx | Transposon Tf2-9 polyprotein from Schizosaccharomyces with 33.26% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC167.08) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_012575125.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |