Ll_transcript_493263

Id TrinityTRINITY_DN52881_c2_g1_i1
Name TranscriptLl_transcript_493263
SequenceATACAAAGTACTACTTTTCAACCTATATTAATTTTCCTCTATATTGAACTGAGATCATGTTCTATCCAAGATTATCCATGAACTCCTTTACTCTCTGACT TTTCCTACAACTACAAGATCAAGAAGGCTGCCATTAGTGCATAATGAAGACATCAGTTTGCATATTTCTCTGCCTAACATTGGTATCAAGAGCCAGAAAA GAAAAAAAAACTGTGTATTGTGTAGAAACAATAGCAACTCTTCAAATTGTTTTTCTACAACACAATTGCAATGGCTACTGATAACTTTGTGCAACCAGCA ATTCCACGTTTTGATGGTCACTATGAACACTGGAGTATGTTGATGGAAAATCTTTTAAGGTCCAAGGAGTACTGGCAAGTGGTTGAAGATGGTGTTGCAA CACCAGAAGAAGGCAGAGAACTTAATGCTGCACAGAACAGAGAGCATGATGCAATGAAGTTGAAAGATTTGAGAGCAAAAAATTTCTTATTTGAAGTCAT TGATCGCTCTATCCTGGAAACCATTCTTTGCAAAGAAACTTCCAAGGATATTTGGGATTCAATGAAAAAGAAATACCAAGGCTCATCTAGAGTCAAACGT GCTCAACTTCAAGCTTCGAGAAGGGACTTTGAAACTTTGCAAATGAAGGAAAGTGAGTCAGTCACTGATTATTGTTCAAGGGTCATGGGAATTGCAAACA GCATGAGAATTCATGGAGAAAAGATGGGAGACACTCTTATTGTTGAAAAAATTCTAAGCTCGCTCACACCAAAATTTGACTATGTGGTGTGTTCAATTGA AGAATCTAATGACACTGATGAACTCCCTCTTGATGAACTTCAGAGTTCCTTGTTGGTTCATGAACAAAAGATGCATAGAAGTTCAAGAGTGGAGGAACAA GCATTGAAGGCTTCTACCAATACTCATTCCAATAACTTCAGAGGAAGGGGTAGAGGTAGAGGTAGAGGTAGAAGATATGGAGGTCGCGGAAATAGAGATT CCAGCAGGAACTTTAAAGACAATCCTCACCAACAACAAGGAAGAGGTAGAATTTATGAAAAACCCAAGGTAGAGTGTTTCAGATGTCATAAGTTTGGTCA CTATGCATATGAGTGTTACACAAAATTGACTAACTACAAAGGGAAAGGAGAACAATCTAACTTTGTAGAGGAGAAGGAAGAAGAAACATTGCTAATGACA TCTCATGAGAAATTCCAATCTGATGTATGGTATATTGATATTGGTTGTAGCAACCACATGTGTGGAAGTAAATCTTCTTTCACTTATTTAGATGAAAACT TTCATTCTAAAGTAAGTTTTGGTGATTGTTCTACTGTAAATGTGATGGGAAAGGAGACATTAAAATTAAAACTAAGAATGGTTTGGTGGAAACCATCTCT AATGTATTTTATGTTCCTGACTTGAAAAGCAATTTGTTGAGTGCTGGTCAATTGCAGGAAAAAGGTTATATAATAACCATACAGAAAGATGCTTGTGAAA TATATGATCCTATCAGGGGAGCCATTGCAGTGGTTGAAATGAGTTCTAACAGGTTGTTTCCTTTGAAGATTCAAAGTGCACAAACCTGTTTGGTGAGTGA AGTGAAGGATCCCTCATGGCTTTGGCATTTTCGCTATGGTCACTTGAATTTCAATGGATTGAAGACACTTCATCAAAAAAATATGGTGGTAATTAATCCA TCTCAAATTTGTGAAGAATGTGTTGTTGGCAAACAACATCGTTCATCATTCCCACAAGGAAAATCATGGAGAGCAAAACAAGTTTTGGAGTTGATTCATT CTGATATTTGTGGACCTATTAATCCTACCTCAAATGGTGGTAAATGGTACTTTATTACATTTATTGATGATTATAGTTGAAAAACATGGGTTTATTTTCT ACAGGAAAAATCTGAGGCTCTATCAGTTTTCCAACAATATAAAGCACTTGTTGAAAAAGGAAGTGGATATGCAATCAAAGTTCTTCGCAGTGATCGTGGT GGTGAATACAATTCACAAGAATTTGTAAATTTTTGTGACATACATGGAATCAAGAGGCAACTTACAGCAGCTTACACACCACAACAGAATGGCATTGCAG AAAGGAAGAATCGAACAATCTTGAATATGGTTCGAACAATCTTGCAGATGAGTGGAGTGCCAAGGAATTTTTGGCCAGAAGCTGTAAATTGGAGCATTCA TTTGCTGGACAGAAGCCCCACCTTTGCTGGACAGAAGCCCCACCTTTGCTGGACAGAAGCCCCACCTTTGCTGTAAAGAACATGACACCTGAAGAAGCTT GGAAGGGACATAAGCCAAGTGTTGAGCATTTCAGAATTTTTGGTTGCATAGCTTATGCTCATGTTCCATATCAGAAAAGGAAGAAACTTGATGATAAGGG TGAAAAATGTGTATTCCTTGGTGTTAGTGAAGCCTCCAAAGCATATAAATTGTACAATCCTCTCACAAAAAGGATTGTAACAAGCAGAGATGTTATTTTT GATGAAGAAAGAACTTGGGAGTGGAATGGGCAGCAACCTAATCCAAATACTTCAGAATTTGGATTTGAAGAAGAGGAACAAGAGAATGGAGGAGAAGAAA AAATTGCAACACCAACAAGAGAAGAAACTTCAACAGATGCACATGTTGAACCTCATAGAAGTCGCATTCGAAAAAGGCCAGCTTGGATGGAAGATTTTGA GGTAACTGGAATTAATCAAATTGATGATCATGTTACTCATTTTGCATTATTTTCAGATTATGATCCCACAACCTTTGAAAGTGTCGCGAAAGAGGAAAAA TGGCAAAAGGCAATGGATGGAGAAATTGAAGCCATAGAAAGAAATCATACATGAGAACTTGTTGATCTTCCAAATGGGCAGAAAACCGTTGGTGTAAAAT GGCTTTTCAAAACTAAACGAAAAGAAGATGGTGAAGTTGACAAGTATAAGGCAAGATTGGTGGCAAAAGGATATAAACAAGAATATGGTGTGGACTATAA AGAGGTGTATGCTCCGGTTGCAAGACATGATACCATCAGATTGGTGGTTGCCATGGCAGCTCAAAACTCATGGCCTATCTATCAGATGGATGTTAAATCA GCATTCCTTCATGGAACCTTGGATGAGCAGGTATTTGTTGATCAACCCCCTAGTTATATTAAAGTTGGGAATGAACATAAAGTGTATAAATTAAAGAAAG CACTTTATGGATTAAAACAAGCTCCAAGAGCTTGGTATAGTCGAATAGAGGCATATTTTTTGAAAGAAGGATTTAAGAAATGCCCATATGAGCACACTCT CTTTGTTAAGGTTGGATCTGAAGGGAAAATACTTATTGTTTGCTTATATGTTGATGACCTTATATTTACTGGAAATGATGTGTGGATGTTTAAAAAGTTC AAAAAGTCTATGATGATTGAATTTGAAATGACTGATCTTGGCTTGATGCATTATTTTCTTGGTATAGAAGTAGTGCAATCAACTAATGGATACTTTATTT CTCAAAAGAAGTATGCCCAAGAACTCTTAAACAGGTTTCAAATGCAGGATTGCAATCCTGTAAGTACTCCATGTGAGTATGGCTTGAAGCTAAACAAAGA CTCTGAAGGGAAGAAGGTGGATAACACATTATTTAAGCAAATTGTGGGTAGTTTGATGTACTTAACTGCTACTAGGCCTGACATAATGCATTATGTCAGC CTAATTAGTAGATACATGGAAAGTCCAACTGAAATGCATCTTTTAGTTGCAAAAAGGATACTTCGTTATATTCAAGGAACTAAACAGCTTGGACTATTTT TCAAGAAGGGTGAAAAATCAGAATTGATTGGGTTCACTGATAGTAATTTTGCAGGAGATCAAGATGATAGGAGAAGTACTTCAGGACATGTCTTTATGCT TGGAACATGTGTTGTCTCATGGTTATCTAAAAACCAACCAATAGTCACTTTATCAACAACTGAAGCTGAGTTTGTTGCTGCTTCAAATTGTGCTTGTCAA ACCATTTGGTTGAGGAAGATCCTTGAAGAACTACATTTCAAGAAAGATGATGCTACTATTATATATTGTGATAATACATCAGCCATCAAACTCTCCAAAA ATCCTGTACTTCATGGAAGAAGTAAACATATTGATGTTAAGTACTATTTTTTGAGAGACCTCAACAATGATGGAACAATTGTCTTGAAGTATTGCAGAAG TGAAGATCAATTGGCAGACATTTTTACCAAACCTCCCGAGGCACCTTCATTCCAAAATTTGAGAGATTTGTTGGGTGTTTGTATGATGCAGCAGCAGAGT TAGTAAACTGAAAATAAAATTTTCAGTTCAAGGGAGGGAATCTCAGTTATTTTATTAGTTTTATTTTCTGTGTTGTGTTGATGGGTGTGTGAGTAGTTTA GCAAG BLAST
Tissuepods
Gene nameLI_gene_196530; 
Additional informationdetails; 

Expression of Ll_transcript_493263

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_493263
BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 21.99% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.15% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019465391.1)
Pfamgag-polypeptide of LTR copia-type (PF14223.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;