Ll_transcript_492656

• Id Trinity: TRINITY_DN52887_c2_g1_i4
• Name Transcript: Ll_transcript_492656
• Sequence: CAATAGGTTAATAGAGTGGCCCAATACTGTTAAGAAAACAACACCAACATTGAGTTTATTTATTTAGGTTCACTTCGTTTCGTTTCTTCACTAATTCCTC TGTTTCTTCAAACGCCAACCTTCAATGGCGACACTATCTCATGCTCAAGCTGTCAAGTCTCTCAACAAATCACCTGGTCGACGTCGTTTTGTTTTTAAGT CATTCAATGATAGAGTGAATGATATTGATATTAACGTGTATCGAAGTCTTGATAAGCTTAAACCTGCACCCTCAGATGGTTCCTTTTTCAGAGATTGCCT TATGGAATGGAGGGAACTGAACACTGCAGAAGATTTCATATCCTTGTATGAAGAAATTATGCCTTACACACAAACATTGCCTTTGGTGCTTTTGCATAAG GAATCTTTAATCACAAAACTTCTTTCTAGGTTACATATGAAAGCAAGGTTATCAGTTGATGCAATTCTCAGGTTGATTGCAGCATTATCTAGAGATCTCC TGGACGAATTTGTTCCGCTTTTTCCAAGAATTGTTGATTCTTTAGTATCTCTTTTAGAAAGTGGTGGTGATAGGGAGCCGGATATCATTGAGCAGATTTT CACTTCGTGGTCATGTGTAATGATGTATCTGCAGAAATATTTAATAGACGACCCATCAGTGGTGCTCAAGGTCACTGAAAAATTGAGATATTATCCAAAG AAGTATGTCCAGCAATTCATGGCAGAGGCAATGTCATATGTTCTGAGAAATGTCCCCAAGAATGAGCAGCTTGACAGAGGAATTGGAATTGTCATGGATG AAGCAGTGAAGGATCCATCTTCCTGCGTAGAATCAGTTGCCGAATTGCTTTATAACATTATGAAAGGTTACTCGTCGAGGTTCCATTCAAAATCAAAGCG AGTGTTAAAATTATTGACAAGTGAAGCATTCTATGGGAATGATTCATGCACCATTTTGAAAGTTGTGAAATCTGTGTTTAAGAAATTATGCCAGGCAATG GAACCCAAAGAGTTGAATTTGGTATGGGATTGCTTATATGAGGAAGTGGGTAAAGGTGTTAGTACTAAAAACTTGGAGCATTTAAGATGCATTTTATCAG TGCTTGTCTCTGCTGTGAAGGTGCAAAATGGGCAAAAGGTGTCTGATTATGAGCCTTTGCTTGAACTTGTAAGGGAGATTGTGCAGACATTTATCACACC TGGTGGTATTGAGTCTCAAAAAGATTCACATTTAGTTATCGATAAAATTTTGAAATTAATGTTGGCCATTCTCAATGGGCTTTATAGTTGCAGTAAGCTT ATGATATCACATTGTGCTCTCCAGTGGGCTCCAATTTTCAAATTACGGAGTCCAAGTTTGGCGCGTTTCATTAGAGAATTGCTAGAGAAGGAATTTTGTT TACTCCCTTTCAGGAGCAATGTTATAAGTGCAATAAATGATTTATTGGAGATCACAGAGGAAGAAGCCATACATTTGTTACAATTATTCTTTGAGAAAAT ACAAAACTCAGACTGTGTGGATGGAACAAGTGCAGAACCACTTGCTAGTATACACAATCGTTTGAAAGGGACTATTCTCCAAATAAAAAATGATATTGAA CGTTCTGATGTGTCGTGTCAAATCGATGAAGGAAAGTTGGCAGTACTATGGGGAGCTGTGAGCTGCTATTCTTATAGGTCTATTGTTGAGTCCGATTCAT CCTTGTTGGTGGATCTTATGCATACTGTAGACAAGCATCTGATAGATAATGCTGACGACATTGCAGACACATCTAAAAAAACTTGGGAAAGCATTATAGG TGCTGCACTAAGCTCTTATAACCGACTTTACAGGGATGATAAGTGTAAAGATGATGAAACTGGAACATTTCTAAGTCTTGGAAAACGCTATAAATCATCT CCCCAAGTGTTGTTAGCCATTGCTGATTATTTGGAACTCAAATATGGTTCCTGTTTAGAAGACACTGGGTGCTGTAGAATGTATCATCCAGAACTAGAAG AAAGGGTTGCAGACACAATGGCAACTTTTGCTGATAATTTGCACCATTTGGACAAGGAGATCCGCATTTCAACTCTTAAAATACTTTGTCACTTCAAACT TTTGGATGGGGACAATTCTTCACTGGATCAACCATCTAAGAAGAAAAGGAAAACTGAAATATCTTCAGCTTCCAATGTGGATTCCACAGGAAACAATGTA TTTATCTATCATCATCATCGTCATTTTTTTACTTCTGCTTTAATCTTTCAATGCTTATTTTTGGTGAAATGACAGGTTCTGCTGCTCCTCCTCTCTAT
• Tissue: pods
• Gene name: LI_gene_196569;
• Additional information: details;

Expression of Ll_transcript_492656

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 1
• PS2: 0.5
• PS3: 0.7
• PW1: 0.4
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_492656

• Blastp: Small subunit processome component 20 homolog from Homo with 24.4% of identity
• Blastx: Small subunit processome component 20 homolog from Homo with 24.4% of identity
• Eggnog: UTP20, small subunit (SSU) processome component, homolog (yeast)(ENOG410XSRE)
• Kegg: Link to kegg annotations (27340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438350.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;