Ll_transcript_493808

• Id Trinity: TRINITY_DN52892_c13_g1_i4
• Name Transcript: Ll_transcript_493808
• Sequence: CTGGACAATATCCCGAAAGACAAATGGACTCAATGTTATGATGAAGGGAGAAAGTATGGGCATATGACGACCAATTTGGCAGAATGTATTAACTCTGTTT TGAAAGGTTGTAGAGCTTTGCCAATCACTGCCATTGTTACTGCAACATATCATCGACTAAATTCTTGGTTTATACATCATAGAACTGAAGCAGAAAATAT GATAAGGGCATGTCATATATATTGCGAAGAACTGAGTAAGGTGATGAACAAAAATAATCGCAAAGCATCATGTCATGTAGTGCGTAACTTTTCAAGGGTA TCTGGAGTGTCTGAGGTTGAGGTTCCTGGAACAGGTGGTAGAAGACACAACAGGGTATACACAGTGAGACTGATGGAAAGTTGGTGTGATTGTGGAGAAT TTCAATCTCTCAGATTGCCATGTTCTCATGCTGTAGCCACATGTGCATCTTTGAACTTAGGTAGTGCACAATTTATTTCACCAATTTATCAGTTAAATAA AATAGTGAAAGTTTATGGAGTAGAGTTTCAACCGGTTCCAAATGAGGAATATTGGCCTATTTATACCGGCCCAACCTTCATTCCAAATCCGGTTATGCGT AGGAATCGGAAGGGTAGACCAAAGACAAAACGGATACACAATGGGATGGATGTATCTCAAAGCCAACCGTATAAAAAATGTGGGTTGTGTAGGACTCCAG GTCACAACAGGAAGAACTGTCCAAATACAAATATTGAACTTGGTGAAAGTCCATTGGATACAATTCATGACATTTTCCTAAACTGCGACAACATGATGGA TGCGTACTGTCAACTTCTACCAGATGTCTTCTCCAACACCAACAACGAGGCACCCCACCTCAACAATTTCATATGTCTGCTGCACCGGAGATTCCTCAAC CACAGAGCCAAACACAAACAGATACTCATCCCCAACCATACACTCAAACTCAACATTCTCAACAACAACCACCACTTGGGTTTGAGGCTTTTGGAGGAAT GGGTAACTACTCATTCTCCCATCTACCTTCATCATCTCAAGTGTCATTGTCCGGTACCACATCATCTACCCCATTATCTGCATTCAACTCTCCTCCATAT TACCAACCAACAATGCCTTCACAACTCGATGAAGATGATGAAGAGGAGCAACAATTGGTTCGAGGTGGAGCAAGACATCGTCAACAGCAACAACCTCATC AACAACGATTCCAACCTCCGAGAAAGAGAAGGTCACCTGCATGTGGCACATCCTCCCACTATCGTCGCTAGCTTTTAGGAATTTTTTATCATTTTTATAT TTGTCTTTCATTTCGGCTTTTACTTATTGTACTTGAATTCAATTTTCAGTAAAATTTCCCTTTTCCAATTCATTCTTCCTTAATAATACTTTTAACATAA AAAATACCAATACAAATTTCATATTATATAATAATAATTTATCTAATTTATTTAAAAAATATTCAACTACAATATTTTATATAGTTAAATAACAATCTGC AAAAAATTAAAAAAAAAATTAAAAATTAAAATGTCGTGGATCGTATCCACGACTTTCATATTTTGGTTTTGACAAAGTCGTGGATAGTATGCACGACTTT CTACCAAATATCCCACCATGAAATCACATTTCTGGTCCACGACTCTCACATGAAAATCGCATTTCTCATCCACGACTTTGATGGAAGTCGTAGTTCCCAT CCACGACATTCAAAAAGTAACACTATAATGGTAAATATTTTACAACTAACACCAAAAAGGTAAAAGTGAGGTCAAACGACCCCACTTTGATGAAAATGCC GTTAAATGACATAAATAAATATTTATATTAGCCGTACATAAATGTTATTGCTAATAATTTTTCCTACATTTTACAAAAATGCCATAAAATGGAACTATCA AATTATCATTTTTATTATTAGAAAAACTTAAAAGATTAAGTTACTACAAGAGTAACTCTTTTAGACTCTTCAACTTAGCCATCAATTTATTGAAAATTTA ATAGTATAGATCTATTCATTATTTCAAATCATTGGATTTCCTAGCAATTGATGACTAAGAAGAATAAGATGATAAGTCTAAAAGAGCAACTTGATCCCTC CCCTTATTATTATACCATTACTATTGTTATTATCATGCTTATGAACCACCGTGGCAGCTGTGATTATATTCTCTTTATCGAAAAAAGAGCAGCCCAATGT ACGAGGCTCCACTTGGTGGGGTCCAGGAAGTATATGTCACTAAGCATCAACCTTATTGATGTATTGTTTGGAAGCCGACAACAAGGCTCAAACCTTTATT CTCATTAGGCAGGGTCAGCTATGTATATCATATGAATCATGCTTAATAACAAATCATATATCTCTAAATCTTTTCTAATGGTTTCTATAAGGTTGTAGTT ACTAACAAAATTATAAGCTTAGGATTCAATTACAGCTGTGGAGGAAACTTAAAACAATGATTACTATTGTTATGAGTAAAGACATATTTTAGTTCTTCAA GTTTTTTGCTTATACCAATTTAGTCTCTGGAAATTTGAAATTCTCAAAATGGTCCCAAAAATATCAAATAACATCTGATAGGAGGACTATTTAAACTTAC ATTCACTATGTTTGAGCACCAGTTTAGATTTTTATTTTTTTTCGGGATCAAATTGGTACACCTGGAAATTTATAAAGACCAAAGTGGGTATTCACTATAT TATTATTATCACATCAATAGCTTGAGTTTTAAATTTTTGTGATTATTGATTGATCCATCTTCAGTTCTTCCGTTCTTAAAAAAATGATTTATGTGCAGGT GATGCAAGAAAGGTTGATCACTTGCTTAACCTTGATGGTGCTAAGGAGAGATTGCATCTGTTCAAGGCAAATCTGCTTGAAGAAGGTTCCTTTGACACTG TTGTTCAAGGTTGTCATGGTGTTTTTCACACTGCCTCTCCATTTTATAATGACGTCAAGGACCCACAGGCTGAGCTAATAGATCCAGCACTGAAGGGTAC TCTAAATGTTCTTAATTCAATCGCGAAATCACCAAATGTGAAACGTGTTGTTTTGACTTCTTCAATCGCTGCTGTTGCTTATAATGGAAAGCCTCGTACT CCTGATGTTGTTGTTGATGAGACATGGTTTTCCAATCCAGATATCTGTAGGGAATCAAAGATGTGGTATGTTCTTTCAAAGACTTTGGCCGAGGATGCTG CCTGGAAATTTGTAAAAGAAAACAACATTGACATGGTTACGATTAACCCAGCGATGGTGATAGGGCCTCTCTTGCAACCAGTCCTTAACACAAGTGCTGC TGCTGTTTTAAACCTAATTAATGGTGCAGAAACATTTCCAAATTCTACTTTTGGATGGGTAAATGTGAAAGATGTTGCAAATGCTCATATTCAGGCATAT GAGATTTCTTCAGCTAGTGGAAGA
• Tissue: pods
• Gene name: LI_gene_196656;
• Additional information: details;

Expression of Ll_transcript_493808

FPKM

• PAB: 19.8
• PNAB: 6.5
• PS1: 8
• PS2: 3.4
• PS3: 5.7
• PW1: 7.2
• PW2: 8.3
• PW3: 8.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_493808

• Blastp: -
• Blastx: Tetraketide alpha-pyrone reductase 1 from Arabidopsis with 47.87% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456145.1)
• Pfam: SWIM zinc finger (PF04434.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;