Ll_transcript_494399

• Id Trinity: TRINITY_DN52894_c6_g2_i1
• Name Transcript: Ll_transcript_494399
• Sequence: TGTTTACCAGTCAAGGGGGGCGAAGACCAGCCCCTTGGGTACGTTAAAACATTCAAAACAAAACATGAACAATACCTCGTTATCATATATGATTTAGATA AAATTACAAAGGGGGACGACCAACCACGAATAGGGCTGGCGTCTAGGCATAAAATAAACGAAGATTGGATGCGTTCCAAGTTCTTGGGATTTCTTGTCCA TTCAGCTCCTGAAGCTTGTATGCTCCCTTCCCAATCTTGCAAGTCACCCGGTAAGGTCCTTCCCAATTTGGCCCCAACTTACCCTTTACTTTGCCAACAT CCGCTCGCCTCAGCACCAAGGCCCCTTCACTGAACTGGCGAGGAACGACGGACGAGTTGTATTTCGCCGCCGTCTTTTGCTTGATTGTTGCCTCCCTTAG TCGGGCCTTTTCTCTGACCTCCTCCACTTCATCAAGATTATTCCTTAGGAGGGATTGATTTCCTTCCTCATTGAATCGTACGGTCCGCCAGGTGGGTTCT CCGATTTCCACTGGAATCATGGCCTCTGAACCATATGTTAAGTTGAATGGTGATTCTCCCGTTGTGGAGTGTGGAGTGGTGCGATACGCCCAAAGCACAT GATGAAGATGGTCTGGCCAGTTTCCTTTTGACTCATCGAGCCTTTTTTTAATCCCCTTCAAGATGACCTTGTTAGCTGCTTCGGCCTGCCCATTAGTCTG GGGATGCTCCACTGATGTAAAGCGTTGTTTGATGTGGAGACCCGATAACAATTCTTGGAAGCGGCGGTCGGCGAACTGGGTGCCATTATCAGTGACTATG GTTGAAGGAATACCAAAGCGAGTTATTATATTCCGCCAAGTGAACTTCTGGATGTTTGCTGAGGTGATGGTGGCCAGTGCTTCCGCCTCAATCCATTTAG TGAAGTAGTCAATGGCGACAATGAGGAACTTTAGCTGCCCAGGTGCTTGAGGGAAAGGTCCCAAGATGTCCATGCCCCATCTGCAAAAAGGCCAAGGCGA CTGAGTGGTCGTTAATTCCTCTGGTGGGGCTTTATGGAGGTCGGCAAAGAGTTGGCAACGAGTGCATTTTCGAGTGAGAATCGTCGCATCCTTTTCAACA GTTGGGCAATAATACCCGGCGCGCAAAACCTTTTTGGCGAGAGATGCTGCGCCCAAATGGTGTCTGCAGCTTCCTTCGTGAATTTCTCTGAGGACGTAGT CTGCCCGTTCTGGTCCAAGGCATTTGAGGAGGGGAGTGGAGAATCCTCGCCTGTACTGGGTTCCT
• Tissue: pods
• Gene name: LI_gene_196672;
• Additional information: details;

Expression of Ll_transcript_494399

FPKM

• PAB: 0.6
• PNAB: 0.2
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494399

• Blastp: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 26.58% of identity
• Blastx: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 26.58% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YIL082W-A)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432977.1)
• Pfam: Integrase core domain (PF00665.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;