| Id Trinity | TRINITY_DN52990_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_370378 |
| Sequence | CTGATTTATTTAAAGAGAGTGAAGGGTTGAACAAGAAGTTCACAAGAACGAACACATGGAAGCGCATGCGGAACATTCCGAAGATGCATCGCCGGAAAAC GACGTCGCATTATCATCAGAAGACCATTCCTCTCTCCCAAAAGAAACGACACCTGAACTCGCCGTTTTGGATTCCCCCGACTCCTCCTCCGAACCCCAAC CACCAAACCCTAATAGCAGAACCCGCCCCGATCCTCCATCTGGTTCCAACGTTCCGCCACCGCGAAAGCGCCGCCGCCGGAAGAAGTTCTTCACTGAGCT CAGCGCAAATGCGTCGCAGAACCGCCGCTCCGACGTAGCCAAAGACACCGACGTCGAGGCTATGATTGCGAATTCCGTTGGGTTCCCTGGAGATTCTCTC ACAGAGGAAGAAATCGAAGCCAATGTTGTCTCTACCATTGGAGGTTCCGAACAAGCGAAATACCTCATTGTACGGAACCACATCCTCGCGCGTTGGCGCT CCGACGTGTCGGTGTGGCTCACGCGCGAGAAAGCCCTGAAATCGATCCGGAACGAGCACAAGGGTTTGGTCGATGTGGCGTACCGGTTCCTTCTAGAACA CGGTTATATCAATTTCGGCGTGGCATTGCCGATAAAGGAAGCGAAATTGAGGTCAATTGATGGAATTGAAAGGGGGACTGTGATTGTTGTTGGTGCTGGG CTTGCAGGGTTGGTTGCTGCAAGACAATTGGTGTTTTTAGGGTTTAAAGTTGTGATATTGGAGGGTAGGACCCGGCCTGGTGGCCGTGTCAAGACGAGGA AGATTGAGGGTGATAGAGTCGAGGCTGCGGCCGATTTTGGTGGAAGCGTGCTTACTGGGATAAATGGGAACCCTCTTGGTGTTCTTGCTAGGCAATTGGG CTTGCCTCTGCATAAGGTTAGGGATATTTGTCCTTTGTATATGCCTGATGGGAAGAATGTTGATTCTGAAGTTGATTCTAGGATTGAGGTTTCATTTAAT AAGTTGTTGGAGAGGGTTTGTAAGCTTAGGCAGAAGATGATTGAGGAGGTTAAATCGGTGGATTGCCCGTTAGGGACAGCACTGGAAGCTTTTCGGAGGG TTTATCAGGTTGCCGAGGATAAGGAAGAGAGGATCCTGTTGAATTGGCATCTTGCGAATTTGGAGTATGCAAATGCTACTCACATGTCTAATTTGTCAAT GGCTTATTGGGATCAGGATGATCCTTTTGAGATGGGTGGTGATCATTGTTTCATCCCTGGAGGGAATGAGGTATTTGTCCGTGCTCTTGCTGAGGACCTT CCGATTTTTTATGGGAAGACTGTGGAGTGCGTTAAGTATGGAAGTGATGGGGTTATTGTTTATGCCGGTGGTCAAGAGTTCCGTGGGGACATGGCTCTTT GTACTGTGCCATTAGGTGTGCTTAAGAAGGGGTCTATTGAATTTGTCCCTGAACTTCCTCAGAGAAAGCGAGATGCGATTCATAGGTTGGGGTTTGGGTT GCTAAATAAAGTAATAATGCTGTTTCCCTATAATTTCTGGGGTGGTGACCTTGATACATTTGGTCATTTGACTGAGGACTTGAGTATGAGGGGTGAGTTT TTTTTGTTTTATAGCTACTCTTCTGTGTCCGGAGGACCACTTCTCGTTGCACTTGTTGCTGGGGAAGCTGCCTTAAGGTTTGAGATGATGTCGCCAGTGG AGTCTGTAAGAAGGGTGTTGGAAGTTCTAAAGAATATTTACAACCCTAAGGGAATCACTGTTCCGGATCCTATTCAAGCAGTGTGTACACGGTGGGGAAA GGATCACTTTGCATATGGATCTTACTCTTATGTTGCTGTTGGGTCTTCGGGGGATGATTATGATATTCTTGCAGAGAGTGTTGGAGATGGGAGGTTGTTC TTTGCCGGAGAGGCAACTAACAAACTGTATCCCGCGACAATGCATGGAGCATTTCTTAGCGGAATGAGAGAGGCTGCAAACATTTTGAGAATGGCGAAGA GAAGGTCTCCAACACCCATTGACAGAACAATAAATATCTCTGGCGAGAACGATGATTTGAACAAATTATTTGTGAACCCTGACCAGACATTTGGTAGTTT CTCTGTTTTGTTTGATCCAAAGCTGAGTGATCTTGACTCTAGTTCATTACTTCGGGTTAGGATTGGAGGAGCAATGATGAGTTCTGTTGGTCTTTATCTG TATGCATTGGTTTCAAAGAAGCAGGTTGTTGACTTGAGTCAAGTAGAGGGAGATGAGAGCAGGATCAGAATGTTAAACCGCGAATTTGGGGTGAGTTTGG TTGGGAGGAAAGGTTTAAATAGTACTGCTGAGACTCTTATTGCCAGCATAAAATTGTCTAGGCTCAATCTTAGTGAAGCAAGAAATGGAGAATGAAAGTT CTTTGTAGCAACATGGACACTAGAACCTCCACTCAACTACACACAACTTATATTTTTAGTTAGGACCAATTAGTAACTGAACATGATGTCGCTCATTGTT GGCCATTTTTGCCAATTGATGTTTCACAATGACATTATTGAAATTTCATTGCTGTGTTAGTTTCATTGTATATGTATGCCTATCTAAATCTAATTTGGAC AATTAAAGGAGTTTTATCTTAATTATATCAGGTATATCTCATTTTTAAAAATTATACTGATTGTCATGACATTTATGTTATGTACATATACTACTAGAGA GTTTGATGTATTAATGAGTATATCATGTACTATACTCACTCTTATTTTTGTTGATTTTCCCCCACTTGTACTAAAAGATAGTAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_196825; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_370378
| Blastp | Lysine-specific histone demethylase 1 homolog 1 from Arabidopsis with 69% of identity |
|---|---|
| Blastx | Lysine-specific histone demethylase 1 homolog 1 from Arabidopsis with 70.4% of identity |
| Eggnog | amine oxidase(ENOG410XSNC) |
| Kegg | Link to kegg annotations (AT1G62830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457860.1) |
| Pfam | SWIRM domain (PF04433.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |