Ll_transcript_478621

• Id Trinity: TRINITY_DN56186_c0_g1_i1
• Name Transcript: Ll_transcript_478621
• Sequence: GTGCCAACAAATTAGATGAATCCCTTGTAGCTCGAATAAGGGCATCGCGAGGGGCAGGACCTTTGAGGTTACGGAGAGAGAAGAGAGCTCTGAATCGCTC ACAAATTGGTTGCTTCGTATCCACCAACAATTCGCACAGCATTTTTTCCATATCAATTGAACTCACCACGTCGTTTATGGAACCCGTCACCATACTCTAC TGCTCTTTCACCCTCGCACCAACCTGCTGCCTCACTATGTATCTTTCATTAGGGTATTGCATTATGGATTTATTATTCCTCAACAATTATGTTTATATTT ATTATTATTATATATAACTTTTTGTTGTATTTTAAAAATTAAT
• Tissue: pods
• Gene name: LI_gene_200033;
• Additional information: -

Expression of Ll_transcript_478621

FPKM

• PAB: 0.4
• PNAB: 0.5
• PS1: 0.5
• PS2: 0.3
• PS3: 0.9
• PW1: 1
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478621

• Blastp: -
• Blastx: Deoxyhypusine hydroxylase from Arabidopsis with 71.67% of identity
• Eggnog: Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (By similarity)(COG1413)
• Kegg: Link to kegg annotations (AT3G58180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426176.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;