Ll_transcript_428017

• Id Trinity: TRINITY_DN60810_c0_g1_i1
• Name Transcript: Ll_transcript_428017
• Sequence: TTTTGGTTCATCTCTCTTTTAAGCAGACACCTTTGTTGTCTCTATGGTTGGTCATGAGATTATAGTGAATGCCCTCCATCCTTATATTAATCTAAAACAT CCTTATCCAACCAAACATCATCATAATCATCATGGCAGTGCCTATGAGTTTGTTGAATGTTTCTCAGAAAGTTATGTCAAAACTCACTTCTCTACTATCC CTCAAGTATGACTTATACACATCATTTGAGCTTGACTTCAACAAGCTTCAAAGTGATCTTACTTCCATTTCAGCAGTTCTTCTTGATGCAGAAAAACAAC AGGCTAAGAGCCACTCTGTTCAAGATTGGTTGGGGAAGCTCCAAGATGCTCTATATGATGCAGAAGATTTGTTAGATGATTTGAATGCTGAAGCTTTGAG GCAGAAAGTGGAGAATGAATTTCGCGTAGTAACTTCGGTAAGAAACTTCTTCTTCCTTAGTGGTATGGATGAGACAGTTAAGAATATTAGAGATAGAATA GAGCATATAGAGAGACAGAAAAGAAATCTTCATTTGCCTCAACTTGTTAATGATAAAGGTAATGGTGTGAACAATATGGTTTCTTATAGGCAGAGGGAGA GAGAGCACACACGTTCATATTTGCATTTCAATGAGGTTGTTGGAAGAGAAAATGATATGAAGGAAGTGGTTGAATTGTTATGTGGTAGTTGTAACAGTAA TGATGGTGTTTGTGTTGTTCCTATTGTGGGAATGGGAGGGTTGGGAAAGACTGCACTTGCCCATTTGGTTTTTGATAGTGATGAGGTCAAAAGGGGTTTC GATTTGAGGATTTGGGTGGATGTATCTGATGATTTTAAGCTAGAGAGGATTTGGCAGAAGAAAATCACTAGGGGTGTGAATTGTTCTGATAATGTTCTTG GCATAGATATCTTGTCATCATTGCAAGATAAAGTGAGTGGCAAGAAGTTTTTACTTGTTCTAGATGATGTATGGAGAGGGAACCAGGTAGAATGGCTTGA TCTTAAGAGTGCCTTAATAAGTGGTGGTGCTAAAGGAGGAAGCAGAATTCTAGTGACAACGCGCTACAAATCAACCATCGGTAGGATTAGTTCGTATAAT TTAGGTGGTCTGCATGATGGTGACTGCTGGTCTCTATTTGAGAAATGGGCATTTGGAGAGGGAGAAAGTGCACAACATCCAAACCTTGCAAAAATTGGTA TAGAGATCGTGAAAAAGTGTGGCGGAGTACCTCTGGCGATACGCACGGTGGGAGGGTTATTGTCGGAGAGCAAAGAAGAGTCCTATTGGCTTTTTGTAAA AGATAGCGATGCTTGGGGTCTGGATATAGGTCATATGCTGGAATTGGAAGACAATAATAACATCTTATCAGTGCTCAAGTTAAGCTATGATCAATTGCCA CTCCATCTAAAAGAATGTTTTGCATATTGCTCCTTACTTACTAAAGGCCTAGAATTTCGAAAGGAGGATTTGATCCAATTATGGATGTCACAAGGCTTCA TTGACATTTCTGAAAGATGTCAGGAATCAGAAGATGTTGGAAGTTTGTATTTTAATGAGTTGGTGTCTAGATCCATTTTTGATGTTGTGCATGAGAATCA TAGAACTGAAATAGTGAAGTGCAGGATGCATGATCTTTTCCATGATCTAGCAAAATCAGTGGCAACACCATTTTTGGTAAACTATGATATTACAAATATG TCTGAGAGAACTAGGCATCTGTCACTTTGGGATCAAGACCTTAGGGAAGATCCAAATTCATTTCTCAAGTTACCGAAGTTGAGAACACTCATTCTGCGTC CGACCGGATTAGGAACCTTTCTAGGATCAGGATCCTATCTGGATGTCCTTCTCTCAGGTTCAACTTACTTACGCGTGTTGGATTTGAGCCGGTTAGGCAT AAAACATCTACCAAATAGCATTGGTTACATGAAACACCTGAGGTATCTAAATCTAAATGGTAACAGTGAACTTCAGTCTCTACCTGATTCCATTTGCAGG CTGCATTCTCTACAGACGTTGAAGCTTTCAGGCTGCATAAAAATTAGTACCTTCCCCAAAAATTTCAGTTACTTAGTTTCACTCAGACATTTGGTAATAA CCTCTCCTCATGTCTTGGAACAAATAGGGACTTTGACATCCCTTAGGTCATTGACAATTGAGCACTGTAGAAATCTCGAATCGTTGTCCGAAGTCACTCA GAACCTCCGTGTCCTTCGAACATTGCGTATCCACAACTGCGGGAAACTAACTTCTTTGCCAGGGAACTTGGTAAACTGCACTGCACTTGAGAATTTGGAG GTTGTAAACTGCCAAAAGATGGGATCATTGGAGGTGTCCATGCAAAGGCTTACTAAACTTCGGTCTTTAACCATCAAGGGCCTACCCAAGTTGGTAACTC TACCAGACAAGCTTGAATGCTATGCAATGAGTCTTCAGTATTTGTTCATCTCAGACTGTGTCATCCTTCAAGAATTGCCTGAATGCTTAGAGAAACTCGC ATCGCTGATGCGCGTGTACATTATGTATTGCCCCAACCTGCACAAGTTACCATCTGGCTTCTGTCACCTCACAGCTCTACAGGTATTGCGGATCGAGGGA TGTCCGTATTTAAGCTCAAGATGCCAAAGGAAAACTGGGGAGGATTGGCACCTGATAGCTCATGTACGAGAAATATATGTCGACAATGTCAAAATTTAGT TCTTCAGAAATGTTCTTTTACACCAATATAACAACATTTGATTTATGTGAGTGTGGATGGATATCAAAGTATTGTATATTTTGAGGTAGAATATAAAAAC ATATGTATAGTTCTTTCACAAGTTCCATTGTCATATTTACTTGCATTCTAGGTAGTTACTGCAGATAGCCGAAAACAGCTTTTTTACAAAGTTTGCAAGT GTCCAGTGCCTATGAAGGTAATTGGAATTTCATGGCAGATCATATTGGATAGATTACCAACTAAGTTTAACTTGTTAATGCTTTCCAGTTTCGCATTGTT TCAGCTGTTTTTTTTGAGCAATTCTGAAACTGAATGCACTATACACGAG
• Tissue: pods
• Gene name: LI_gene_204651;
• Additional information: details;

Expression of Ll_transcript_428017

FPKM

• PAB: 2.7
• PNAB: 5.9
• PS1: 17.6
• PS2: 4.4
• PS3: 9.8
• PW1: 6
• PW2: 8.1
• PW3: 6.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428017

• Blastp: Putative disease resistance protein RGA3 from Solanum with 34.1% of identity
• Blastx: Putative disease resistance protein RGA3 from Solanum with 34.1% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465099.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;