Ll_transcript_355554

• Id Trinity: TRINITY_DN6468_c0_g1_i1
• Name Transcript: Ll_transcript_355554
• Sequence: CCTCAATGTTACTTAAGGAATGAAGTGAAATCAAGCAAAGCAATTTCAATTCCCTACTCAAATTCTAACCAACCCAACACAAAATCACTTGTAATGGAAA ACATTGAAGTCCTTTCCAAGGTTTTGGTCCTTTCCATCATCATCGTTTTCTTCATCCTAGCCTTAATACATGTTCTCTGTTTCTACACTCAACAACTTAT TTTTGATGCTCATCATCGTTCCTTGCAAGAAGGCAACAACAATTCTGCATCTGGTCTTGATGCTTCAGTCATTGGCTTAATCCCTGTCTTTGCTTACAAC TCTAATATGTGTTTAGAAAACCCAATCAGTTGTGTGATTTGCTTGTCTGAGTTTCAAGAAGGTGAAATGGGTCGAGTTTTGCCCAAATGCAACCACGTGT TTCATGTTGATTGCATTGACATGTGGTTATATTCTCACACCACATGTCCTCATTGCCGTGTCTCAGTAGAGCTCACACCACATGTATGAACTGTACTTTG GTTCTTGACATACCAGCTAATTATTGCTTCGACTCCACTATTAGAGTAGTAATTTAACTATTTTGTTATAAAAATAATTGATATTTAATGTTCATATTAT TATATACATAGTTTAAGAAGTTTCTAAACAAGATAAAGATTGACAATTTGACTAAAATATTCATTTTAAATTTTCATATATTTCTCACTTTTCTCTACAA TAAATTCAATAGTTTAAAATCTATGCATTATCTATCATTGATTTGTATTATTTTGTTTAAGAG
• Tissue: pods
• Gene name: LI_gene_208566;
• Additional information: details;

Expression of Ll_transcript_355554

FPKM

• PAB: 5.7
• PNAB: 0.7
• PS1: 1.3
• PS2: 0.4
• PS3: 0.9
• PW1: 1.3
• PW2: 0.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_355554

• Blastp: RING-H2 finger protein ATL2 from Arabidopsis with 36.2% of identity
• Blastx: RING-H2 finger protein ATL2 from Arabidopsis with 48.04% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G16720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439608.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;