Ll_transcript_382858

• Id Trinity: TRINITY_DN72585_c0_g1_i1
• Name Transcript: Ll_transcript_382858
• Sequence: TTTTTCATTCCTCAAAAATCTTTCTCTCACTTCACTCCCTTTTGAAACCAAACAATGAGACAACAACAATGGCGTCTTCTCTCCCTTCTTCGCAAAACCA CAACCAATCACGTTCTCTTCAACCCAAATCTCCATTCCCATTTTTCACTTCGTTCTTTCTCTTCAACCCAACCAAGTTTCAAAATTCCCCATTTTACCCC TCACCCCTTTTCTAGAACCTTCTCCTCCGACCCAGTTCCTGAACCCAACGATTCCGATAACAGCCACATCGTTATCTCCGATATCTTCTCTAAACCCACA CAAAACGACGTCGTCACGAGCCTCCTCGATTCGAATCGCGTTTCGATTAACCACGACTCAGTGATTCAGATATTAGGGAAACTCGATTCCAACGCTGACG TGGCAAGGAGATTCTTCGATTGGGTTCTAGAAACTTCTCCTTGGAGGTTGAGTTCTAAGTCTTATAACGCATTGCTGAGTGTTTTGGGGACCAATGGGTT AGTTAATGAGTTTTGGGATTTGGTTGGTGTTATGAAGAAGAAGGGTTTCGGGGTTTCGAAAAATGTGAAAGGGAAAATGTTGGAGATTTTTGAGAAGGAT GGATTGTTTGATGATGTTTTGAAGTTGAATGCTTTGTTCGAGTCCGGGTCGATCGATAACTCGAATGAGAAGAAGTGTTCTAGGGTTTCTAAGATTGTTA GGCGACGTGATGTGTGGGATGATGAGGTTGAGAATCAAATTAAGGAATTGAATGTGGAATGGAGTAGCGATGCGGTTAAGTTGGTTTTGGAAGGTTTAAG TAGCGAGCCGAGTAAGGCTTTGATATTTTTCCGGTGGTTGGAGGAGAGTGGGGGGTTTAAGCATGATGGATTGACTTATAATGCGATGGCGAGGGTGTTG GGGAGGGAAGATTCGATTGATCGGTTTTGGAAACTTCTTCGTGATATGAGGGGTGCTCGTTATGATTTGGAGGATGAAACATTGGCTATTGTTTTAGGAA GGTTTACGAAGAGGAAAATGATTAAGGATGCTGTTGAGCTTTACGAGTTTGCTGTGGCCGGTAAGAATAAGCCTTCACGGGATTGTTGTACCTTTATTTT GAAGAAAATTGTTGTTTCTAAGGAATTAGATTTAGATTTGTTTTCGAGAGTGTTGAAGGTTTTTACTGAAAGTGGGAACGTGTTGACCGATTCCATGGTT AATGCTGTTCTGAAGTCTTTAACCAGTGTTGGTAAGATTGGGCAATGGAATAAGGTTTTGAAAGAAATGGAAGGTTTTATGTTAGGCGCTCGCGGTAATT TACAGCAAAAGATTGCGTATCGACTATGTGCTGCTGGTTACAAGGATGAAGCGAGTGAGTTCATTGGTAATATTGAAGCATGTGGGTCTATTCCGGAACA CAAGACATGGGAGTCTTTAGTCGAGGGGCATTGTGTTGCTGGGAACCTTGATAAAGCTTTTGCCTCTTTTAAAGAGATGATTGAGAAAGAAGGTGTTGCT TCGGCGGGTTTGGCTTTTGATGTGTTAGTGAATTCATATTGTCAACTGAATAAGGCAATAGATGCATACAAGATTCTCAATGAGATAGTGAATGAAAAGG AGCTAAAGCCCCGACACTCGACTTACAAGCTGTTGATAACTAAGTTATTGGTTCAGGGAGGATTTGCCGATGCTTTAAATATTTTGGGCTTGATGAGAAG CCACGGATTTCCACCTTATACCGATCCATTATTTGAACACATATCGAAAAGTGGAAGTGCTGATGATGCTATTCTGTTTCTAAAGGCGATGACTTCGCAG GATTTTCCATCTACGTCCGTGTTTCTCCGCATGTTTAACGCCTTCTTCAAGCATGGAAAGCACGATGAAGCGCAAAACTTCCTCTCTAAATGTCCAGGCT ACATTCGTAACAACGTGGATGTCTTGAATCTCTTTTTTTCGGTGCACTCTAAAGACACTGCTTCTTCTGGTACGTTGGCTGCTTAAGTTTTCAGAATATA TCTCATATTGTACTCTTGAGAAGAATGTACTATTGCATTTGCTCACAAAATCTGGTGAAAATTATTCTTTTTGTCCTTGATATAACATCACCGATCTAAG AAGTCGAATCTAGCTTTGAATAAAGCAGTAAAATCTTTGGTTTGTGTTTTGCATGTTTGCCATGGTTTTTGTCTTCAACATTGCAATAGATTGAAAGACA AGAAACAAATGCAGTGCTTGATATTAGTGTACTTTACGGTTCTCCCTTCATCCTGGTTTTAGATTGTCTTAATGTTAATTGCAATTCAGGTGATGATATA TCATATATGATCAATGTTTTTCACATGCAAAAAACTACTAACTGTCCTCTTCGCTTGCGATAAGAAAGCTGCGGACATTTATCTTCCCCGGATCCTGTTA CGTGAGAGTTTCGTGTATTGAACCATCCTTTTTTATTTATGTCGGGATGCCTGCAATCTCATTTCAATATTTTTGCATAAATGGTCATGGAACTATGCAG CATTGCATTTGCTTTTTATTTTCTTGACTAGTTACGTTGATAAATGACCTTACATTTATATATGATGAGCCATAATATTATTTAC
• Tissue: pods
• Gene name: LI_gene_216448;
• Additional information: details;

Expression of Ll_transcript_382858

FPKM

• PAB: 1.2
• PNAB: 15.8
• PS1: 9.2
• PS2: 9.1
• PS3: 9.6
• PW1: 7.7
• PW2: 6.2
• PW3: 6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_382858

• Blastp: Pentatricopeptide repeat-containing protein At3g02490, mitochondrial from Arabidopsis with 47.35% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g02490, mitochondrial from Arabidopsis with 49.33% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G02490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456471.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;