| Id Trinity | TRINITY_DN72664_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_482033 |
| Sequence | CATAGATTCAAATGGATCATCCAATCATTTTTTATTTATCATAATAACTCACCTTCCATGCAACCTCTTCTCAAATCTTCCCAACGGTATATAAAAACAC ACTGAGACTCTTCTTCTTTCCCACAAACCAAACTTACCGTATCTGAACTCTTGTTTTCGTTAACTTGTCTACTTTTTAGTATGGAAGACCCAAATTCAAA ACCTGTCTTGATCAGAGAAGTGTGGGCTAACAATCTTGAATCAGAATTCAATCTCATCCGTCAACTCATCAATCAATACCCATTTGTATCCATGGATACT GAGTTTCCTGGTGTTATTTTCAGCCAACATCTTCTCACAAAAACTTATCACCACCAGAACCTGCACCCCTTTGATGAATACCGGCTTCTAAAAGCGAACG TCGATGAACTCAACCTCATCCAAGTTGGTCTTACCCTCTCTGATGCACGTGGCAACCTCCCTCACCTTGGAACCAACAACTCCTTCATCTGGCAATTCAA CTTCTGCGACTTCGATATGGCGCGTGACAAACACGCTCCTGATTCAATTGCTCTCCTAAGCAATCAAGGTATCGATTTCAAGCGTAATGTTGTGGACGGT GTTGAGTCTGCACGCTTTGCTGCAATGATGTTTTCTTCTGGGCTCCTCTACAACAAGGCAGTGACTTGGGTAACGTTCCATAGTGCCCATGATTTCGGGT ATCTGGTGAAAATTTTGACACAAAGGAAGTTACCAACTAGGTTGGATGAGTTCTTATGGACGGTGAAACGGTTATTCGGGAACAAGGTTTATGACATTAA ACATATGATCCGTTATTGTGACTCACTTTATGGTGGTTTGAATAGGGTGGCCCAAACCCTCAACGTGTTTCGAGTCGTTGGAAAGTGTCACCAAGCTGGT TCAGACAGTTTATTGACTTGGCATGTATTTCAGAAGATCAGAGACACATATTTTGTGAAAGGCGGCCATAAAAAATGTGCCAAAGTGTTGTTCGGGTTAG AGTTATATGCAATTCATCAAAAGGTGGTTAATCATGGTGGAAAAAATAGATTTTGCCCACAAATGAAGTTTAGCTACAATGTCTTGAATCCTCAAATTAT CACTTTAAGGAAAGCTTTATTCTAACTGTGAATACATTTGAGGGTTAGTTCACGTTGTTACTACCCGGTAAACAAATAAGAGTGCCTGTATTTTATTATT TGAACAGAAAAGTTCACAGTATAAATACAATTCTATTGATTATTTTTTGATATATTATTATGACTTCTATACTTTACCTTGATATTTCCTATCTGTTAGT CTGTTAATTAACAAAAAGTCAGAAATTTGGTAGATAGTAATCAAGAAAGCTCCAGGTCATAAATAGCACACTGCATAATTTCTCTATGAAAGAATTAGCA CAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_216534; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_482033
| Blastp | Probable CCR4-associated factor 1 homolog 9 from Arabidopsis with 63.04% of identity |
|---|---|
| Blastx | Probable CCR4-associated factor 1 homolog 9 from Arabidopsis with 63.04% of identity |
| Eggnog | Ccr4-not transcription complex, subunit(COG5228) |
| Kegg | Link to kegg annotations (AT3G44260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449855.1) |
| Pfam | CAF1 family ribonuclease (PF04857.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |