Ll_transcript_334391

• Id Trinity: TRINITY_DN7972_c0_g1_i1
• Name Transcript: Ll_transcript_334391
• Sequence: GGGTGAGTGAGTCTAAGATAGTAGTACTCTCACTCACTTTTTCTTTCTTCTCTCTCTCTCTCAACCAAAAACCTCAATTTCCTCTTCTTCAGGCTGGTTT TCAAGTTTAAAAAGGGTTTTCTAGAGAGCACCTAAATTTTGTTATTCAGCTGCTTCTCGCTGGAGTGAGCCATTAGGACAGTTGCAGGAGCTGTGTAAAT TAAATTCTTATGGCGGATTCTGATGAAGTTGCAAAATCTACTGAAAACCAGCAAACAGAGCAAGTGTGTAGTTTCTTCAGAAAACCTGTTAATAAAAGGA ATATAAGGAAACGGACTGTTGATAATGAAGATGATGATGAGGATTCCAGGAATGAAAGCTCTTTGTTACATATTCAGAAAAAGACCTTGAAGCCGGACAA TAAGTTGTACTTTTCCTCCAGCACCTCAAAAAGCTCTGCATCTGCTGAACAAAGCGAAGAATCTGAAAAACCAGTTTTCCACTTTGAGTCTGCCAGAGAG ATTCAAGTTCAACATGATAACAAAGCAACAGCAACTTTAGAGACTGAGACTGATTTTTCGAGAGATGCTCGTGCCATCCGTGAAAGAGCACTTAAGCAAG CTGAAGAGAGTCTGAAGGGGAAAGGCACTAGTTCTGGAGGGGGTGATAAATTGTATAAGGGGCTCAACAGTTACAAAGATTACAAGGCTGGCTTTCGTAG AGAGCAAACAATTGCTAGTGAAAAGGCTGGTGGGTCACATGGTCCTCTCAGGGCTTCAGCTCATATTAGAGTTTCGGCAAGATTTGATTATCAACCTGAC ATATGTAAGGATTACAAGGAGACTGGTTACTGTGGATATGGTGATTCATGTAAGTTTATGCATGATCGAGGGGATTACAAGTCTGGGTGGCAGATGGAGA AGGAATGGGAAGAAGCTGAGAAAGCAAGAAAGATGAGATTGGCTGCGGGTGAGGATGCGGAAGAGGAGGGAGCTAGTTTGTCTGATGAAGATGATGAGGA TGCATTACCATTTGCATGTTTCATTTGTAGAAATCCTTTTGTGGATCCTGTTGTAACCAAATGCAAGCACTACTTCTGTGAGCATTGTGCATTGAAGCAT CATGCAAAGAATAAGAAGTGTTTTGTCTGCAACCAGCCAACTCTTGGCATTTTTAACGTTGCGCAGGAGATACGGCGGAAGATAGCAGAGGGCAAATGAT TTCACTCAATACAATCCATGGATCTCTTTGCTAAGTGGAACTTGTCTTTCCCCCATTTGAATTCATCATTAGAGATTATGAAACACTGTATTGGGTTGAA AACATAAACCAGTTTGCCAGTGGGATTAGATGTTATTCACATTGTGGTAATTTTTTGACTAATAGATCCCAGAATCTGTATTAGTGAGAGGCATTTGCTT ATTAGTATTTAAGTGCACGTTAATAGTGCATGCTGTGGTTCTTTTACTATCAGAGCATTTGCTTATTGTGTTGAGTGTTGACAGCAGATTTGTCCTTTTA TCAGTAAATGTAAAATGTGTTAAGAACTGTGCACAAGTATGTGTATCACATATATAGATTACAAAATATTACCCTATAATAACATAATAAATTGTATTTT TGATTAATTGCACTTAAAACTATCTGGGGCACAACACATACTCA
• Tissue: pods
• Gene name: LI_gene_223581;
• Additional information: details;

Expression of Ll_transcript_334391

FPKM

• PAB: 10.2
• PNAB: 18.6
• PS1: 24.1
• PS2: 21.6
• PS3: 25.4
• PW1: 23.2
• PW2: 26.8
• PW3: 33.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_334391

• Blastp: Zinc finger CCCH domain-containing protein 1 from Arabidopsis with 69.18% of identity
• Blastx: Zinc finger CCCH domain-containing protein 1 from Arabidopsis with 66.17% of identity
• Eggnog: Ring finger protein(COG5152)
• Kegg: Link to kegg annotations (AT1G01350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424045.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;