Ll_transcript_334392

• Id Trinity: TRINITY_DN7972_c0_g1_i2
• Name Transcript: Ll_transcript_334392
• Sequence: GGGTGAGTGAGTCTAAGATAGTAGTACTCTCACTCACTTTTTCTTTCTTCTCTCTCTCTCTCAACCAAAAACCTCAATTTCCTCTTCTTCAGGCTGGTTT TCAAGTTTAAAAAGGGTTTTCTAGAGAGCACCTAAATTTTGTTATTCAGCTGCTTCTCGCTGGAGTGAGCCATTAGGACAGTTGCAGGAGCTGTGTAAAT TAAATTCTTATGGCGGATTCTGATGAAGTTGCAAAATCTACTGAAAACCAGCAAACAGAGCAAGGTAAGTGCGTACTGGTTATTTTATCAATAGCAAGTT GTAATATCTTTGTATTGGACTTATAGACGGTTGTTTATATTTTGTTTGCTGCTTCTTATGTGCTTTTTATGATGTTGAATTTTTATTCTTTGCTATACCC TATGTATCTTCAGTGTGTAGTTTCTTCAGAAAACCTGTTAATAAAAGGAATATAAGGAAACGGACTGTTGATAATGAAGATGATGATGAGGATTCCAGGA ATGAAAGCTCTTTGTTACATATTCAGAAAAAGACCTTGAAGCCGGACAATAAGTTGTACTTTTCCTCCAGCACCTCAAAAAGCTCTGCATCTGCTGAACA AAGCGAAGAATCTGAAAAACCAGTTTTCCACTTTGAGTCTGCCAGAGAGATTCAAGTTCAACATGATAACAAAGCAACAGCAACTTTAGAGACTGAGACT GATTTTTCGAGAGATGCTCGTGCCATCCGTGAAAGAGCACTTAAGCAAGCTGAAGAGAGTCTGAAGGGGAAAGGCACTAGTTCTGGAGGGGGTGATAAAT TGTATAAGGGGCTCAACAGTTACAAAGATTACAAGGCTGGCTTTCGTAGAGAGCAAACAATTGCTAGTGAAAAGGCTGGTGGGTCACATGGTCCTCTCAG GGCTTCAGCTCATATTAGAGTTTCGGCAAGATTTGATTATCAACCTGACATATGTAAGGATTACAAGGAGACTGGTTACTGTGGATATGGTGATTCATGT AAGTTTATGCATGATCGAGGGGATTACAAGTCTGGGTGGCAGATGGAGAAGGAATGGGAAGAAGCTGAGAAAGCAAGAAAGATGAGATTGGCTGCGGGTG AGGATGCGGAAGAGGAGGGAGCTAGTTTGTCTGATGAAGATGATGAGGATGCATTACCATTTGCATGTTTCATTTGTAGAAATCCTTTTGTGGATCCTGT TGTAACCAAATGCAAGCACTACTTCTGTGAGCATTGTGCATTGAAGCATCATGCAAAGAATAAGAAGTGTTTTGTCTGCAACCAGCCAACTCTTGGCATT TTTAACGTTGCGCAGGAGATACGGCGGAAGATAGCAGAGGGCAAATGATTTCACTCAATACAATCCATGGATCTCTTTGCTAAGTGGAACTTGTCTTTCC CCCATTTGAATTCATCATTAGAGATTATGAAACACTGTATTGGGTTGAAAACATAAACCAGTTTGCCAGTGGGATTAGATGTTATTCACATTGTGGTAAT TTTTTGACTAATAGATCCCAGAATCTGTATTAGTGAGAGGCATTTGCTTATTAGTATTTAAGTGCACGTTAATAGTGCATGCTGTGGTTCTTTTACTATC AGAGCATTTGCTTATTGTGTTGAGTGTTGACAGCAGATTTGTCCTTTTATCAGTAAATGTAAAATGTGTTAAGAACTGTGCACAAGTATGTGTATCACAT ATATAGATTACAAAATATTACCCTATAATAACATAATAAATTGTATTTTTGATTAATTGCACTTAAAACTATCTGGGGCACAACACATACTCA
• Tissue: pods
• Gene name: LI_gene_223581;
• Additional information: details;

Expression of Ll_transcript_334392

FPKM

• PAB: 0.1
• PNAB: 0.9
• PS1: 0
• PS2: 0.7
• PS3: 0.6
• PW1: 0.3
• PW2: 0.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_334392

• Blastp: Zinc finger CCCH domain-containing protein 1 from Arabidopsis with 72.97% of identity
• Blastx: Zinc finger CCCH domain-containing protein 1 from Arabidopsis with 69.9% of identity
• Eggnog: Ring finger protein(COG5152)
• Kegg: Link to kegg annotations (AT1G01350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424045.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;