Id Trinity | TRINITY_DN8699_c0_g1_i1 |
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Name Transcript | Ll_transcript_333235 |
Sequence | CAAACCACATGTACAGCACACTATACTAGAATTCAATTAAAAGTTTCTCTCACTTCTTTCAATCTCTACACTTTCACTCCTTCTTTTCTTCTTCACCCCC TCTTGGAATCTCTTAACAAAATAAAACAAACAAAAATAGCAACGCCTGAAATGGATGGCACCTCCAACAAACAACCTCAAATCTCCGAAATGTTCCAGAA ATTCGCCCTTGCCTTCAAAACCAAAACCTTCGAATTCTTCGCCGAAGAAGAAAACACCGCCGCCACCGATGACGACGGCTTCTCCCTCCTTGACTCCGCC GAAGAAATCATCCCCGACCAGAAAGTCGTTGTCATCAAACCTGACCCTAACCCATCTCACAATTCCTCACCCGGAACGCCCTCACCTCAATCCCCGGTTC ATTCAACCCCACCGGTTCAACTAACCCAGATCATAAACCCGGTTCAACCTCCCGAACCGCCTAAAACGACGCCGTTAACTTCAAACCAGATCAGAGAAAT AACCCACACGCTGATCTCATCTCTTTTCGCTACGGTTTCTTCCTTCGAAGCTTCCTACTTCCAATTACAGAGCGCACACGTGCCGTTTGTGGAAGAGCAC GTGACTTCTACCGACAAAGTCTTAGTCTCGCATCTTCAGAGGCTTTCTGAACTTAGAAACTTTTACAGAGACTTCCGCCTTAGCCCCGAGTCTCGGCCCG ATTTCCAAATCGGGTCGTGGCTCGAAGCTGAGGTGGAAGAGAATCAGAGCAAATTGAGGACGCTTGGGACCGTCTCAAATCGTCTTCAATTGGAGCTGGA GCTGAAACACGACGATGTTTCAGCCTTAAGAAAAAAGTTGGATGAGATTAACAAGGGTAACATGAAGTTATCAAAGAAACTTTGTGTTAATTTGGATCCT AATTGTGATGTTTTGTTAACAGTTAGAGTGTTTGAGTCATTGTTACAAGATGCTTCTAGAGCAACACATAAATTTACGAAGATTTTAATTGGTTTGATGA GAAAAGCAGGGTGGGATTTGGGTTTAGCTGCTAGTGTTGTTCATCCTAATGTCGAATATGTGAAAAAAGGCCATAATCAGTATGCATTATTGTCTTATGT TTGTTTGGAAATGTTTCAAGGTTTTGATTCTGAAGGGTTTGGAGTGAGTGGTGGTGATGAAGTTAAATGTGGTTCATTGAAGCAATTGCTGGAGCATGTG TCGAGCAATCTGATGGAGCTGCTTACTTTGCATCCTAGTTGTGATTTTTCAAAATTTTGCGACCGGAAGTATGAGCAACTTATCCACCCTTCAATGGAAT CATCAATTTTTGTTGACTTGGATGGAAAGGAAGCGGTTTTGAAATCGTGGAGATCATTGAGTATGTTTTATGAGGCGTTTGTCGGAATGGCTAGCTCGAT ATGGACACTGCATAAGTTATCCTATGCCTTTAATCCTCCAGTCGAGATTTTTCAAGTGGAAAGAGGTGTGGAGTTCTCCATGATATATATGGAAGATGTG ACAAAGAGGCTAACTTGGCCTAACAAAGGCCGGGCAAAGGTGGGTTTCACAGTGGTTCCAGGTTTTAAAATTCGGGGGATAGTTATTCAATCACAGGTTT ATATAAGTGACTTCAGATGTACAGAGTATTTTAGTTACAAGTCATGAGCACTGCATTCGGATGAAACTGCTATCTGCGGGAAATGGAACTATAGCTCTAG TTGGTTCTGATAGTACACACTTGGTTTATTGGGTCAATTCAAGTGAAAAACCGGAGTTTTTTTTGCCAGGGTTTGTTTCAAGATTCCTGGTACTTAGACA ATGCCAGTCCTTATATGCCTGAAGATGTTTAGGTACTGCTAATTTGCTGAGATGCTGAAGCTGGAGCAGTGATGGTGATTTGAAGTCATTTGGTATTTTG TGCCAGTGCTATGTGAGGATCGGTACTTGCCTACTCGGTAGTGTGTTTGGTGTTTTTTTTCTTTCTGATCTTTTTTTGTTTCCCAGATTTGTTTGTATGT TTTTCGAGTTAACTGTACAGAACACTGCTATTCTGGGTACTCATAACAACAAATACATCAGTCAATTGTGTAGTCATCACTTATATATATATATATATAT ATATATATATATATATATAT BLAST |
Tissue | pods |
Gene name | LI_gene_223802; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_333235
Blastp | Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 29.15% of identity |
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Blastx | Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 29.15% of identity |
Eggnog | Plant protein of unknown function (DUF641)(ENOG410YCXF) |
Kegg | Link to kegg annotations (AT5G58960) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432965.1) |
Pfam | Plant protein of unknown function (DUF641) (PF04859.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |