Ll_transcript_333235

• Id Trinity: TRINITY_DN8699_c0_g1_i1
• Name Transcript: Ll_transcript_333235
• Sequence: CAAACCACATGTACAGCACACTATACTAGAATTCAATTAAAAGTTTCTCTCACTTCTTTCAATCTCTACACTTTCACTCCTTCTTTTCTTCTTCACCCCC TCTTGGAATCTCTTAACAAAATAAAACAAACAAAAATAGCAACGCCTGAAATGGATGGCACCTCCAACAAACAACCTCAAATCTCCGAAATGTTCCAGAA ATTCGCCCTTGCCTTCAAAACCAAAACCTTCGAATTCTTCGCCGAAGAAGAAAACACCGCCGCCACCGATGACGACGGCTTCTCCCTCCTTGACTCCGCC GAAGAAATCATCCCCGACCAGAAAGTCGTTGTCATCAAACCTGACCCTAACCCATCTCACAATTCCTCACCCGGAACGCCCTCACCTCAATCCCCGGTTC ATTCAACCCCACCGGTTCAACTAACCCAGATCATAAACCCGGTTCAACCTCCCGAACCGCCTAAAACGACGCCGTTAACTTCAAACCAGATCAGAGAAAT AACCCACACGCTGATCTCATCTCTTTTCGCTACGGTTTCTTCCTTCGAAGCTTCCTACTTCCAATTACAGAGCGCACACGTGCCGTTTGTGGAAGAGCAC GTGACTTCTACCGACAAAGTCTTAGTCTCGCATCTTCAGAGGCTTTCTGAACTTAGAAACTTTTACAGAGACTTCCGCCTTAGCCCCGAGTCTCGGCCCG ATTTCCAAATCGGGTCGTGGCTCGAAGCTGAGGTGGAAGAGAATCAGAGCAAATTGAGGACGCTTGGGACCGTCTCAAATCGTCTTCAATTGGAGCTGGA GCTGAAACACGACGATGTTTCAGCCTTAAGAAAAAAGTTGGATGAGATTAACAAGGGTAACATGAAGTTATCAAAGAAACTTTGTGTTAATTTGGATCCT AATTGTGATGTTTTGTTAACAGTTAGAGTGTTTGAGTCATTGTTACAAGATGCTTCTAGAGCAACACATAAATTTACGAAGATTTTAATTGGTTTGATGA GAAAAGCAGGGTGGGATTTGGGTTTAGCTGCTAGTGTTGTTCATCCTAATGTCGAATATGTGAAAAAAGGCCATAATCAGTATGCATTATTGTCTTATGT TTGTTTGGAAATGTTTCAAGGTTTTGATTCTGAAGGGTTTGGAGTGAGTGGTGGTGATGAAGTTAAATGTGGTTCATTGAAGCAATTGCTGGAGCATGTG TCGAGCAATCTGATGGAGCTGCTTACTTTGCATCCTAGTTGTGATTTTTCAAAATTTTGCGACCGGAAGTATGAGCAACTTATCCACCCTTCAATGGAAT CATCAATTTTTGTTGACTTGGATGGAAAGGAAGCGGTTTTGAAATCGTGGAGATCATTGAGTATGTTTTATGAGGCGTTTGTCGGAATGGCTAGCTCGAT ATGGACACTGCATAAGTTATCCTATGCCTTTAATCCTCCAGTCGAGATTTTTCAAGTGGAAAGAGGTGTGGAGTTCTCCATGATATATATGGAAGATGTG ACAAAGAGGCTAACTTGGCCTAACAAAGGCCGGGCAAAGGTGGGTTTCACAGTGGTTCCAGGTTTTAAAATTCGGGGGATAGTTATTCAATCACAGGTTT ATATAAGTGACTTCAGATGTACAGAGTATTTTAGTTACAAGTCATGAGCACTGCATTCGGATGAAACTGCTATCTGCGGGAAATGGAACTATAGCTCTAG TTGGTTCTGATAGTACACACTTGGTTTATTGGGTCAATTCAAGTGAAAAACCGGAGTTTTTTTTGCCAGGGTTTGTTTCAAGATTCCTGGTACTTAGACA ATGCCAGTCCTTATATGCCTGAAGATGTTTAGGTACTGCTAATTTGCTGAGATGCTGAAGCTGGAGCAGTGATGGTGATTTGAAGTCATTTGGTATTTTG TGCCAGTGCTATGTGAGGATCGGTACTTGCCTACTCGGTAGTGTGTTTGGTGTTTTTTTTCTTTCTGATCTTTTTTTGTTTCCCAGATTTGTTTGTATGT TTTTCGAGTTAACTGTACAGAACACTGCTATTCTGGGTACTCATAACAACAAATACATCAGTCAATTGTGTAGTCATCACTTATATATATATATATATAT ATATATATATATATATATAT
• Tissue: pods
• Gene name: LI_gene_223802;
• Additional information: details;

Expression of Ll_transcript_333235

FPKM

• PAB: 11.1
• PNAB: 3.7
• PS1: 5.5
• PS2: 4.3
• PS3: 5.4
• PW1: 5
• PW2: 5.5
• PW3: 3.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_333235

• Blastp: Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 29.15% of identity
• Blastx: Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 29.15% of identity
• Eggnog: Plant protein of unknown function (DUF641)(ENOG410YCXF)
• Kegg: Link to kegg annotations (AT5G58960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432965.1)
• Pfam: Plant protein of unknown function (DUF641) (PF04859.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;