Protein Coding Transcripts

Showing 2,381-2,400 of 267,349 items.
#ID TranscriptLuluDB transcriptORF TypeBlastp annotationsBlastx annotationsPfam annotationsRfam annotationsEggnog annotationsMirBase annotationsKegg accesionsCantataDB accesionsNCBI protein accesionsBlast GO accesionsPfam GO accesions 
  
2381TRINITY_DN39205_c0_g1_i1Ll_transcript_428128completeAAA-ATPase ASD, mitochondrial from Arabidopsis with 61.54% of identityAAA-ATPase ASD, mitochondrial from Arabidopsis with 60.57% of identityDomain associated at C-terminal with AAA (PF14363.5)-Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)-AT5G40010 (ath)-XP_019442623.1GO:0005783GO:0005524
2382TRINITY_DN39206_c0_g1_i1Ll_transcript_4281435prime_partialNADH-ubiquinone oxidoreductase chain 2 from Podospora with 54.81% of identityNADH-ubiquinone oxidoreductase chain 2 from Podospora with 57.95% of identityProton-conducting membrane transporter (PF00361.19)---PoanfMp04 (pan)-YP_009237625.1GO:0016021-
2383TRINITY_DN39208_c0_g1_i1Ll_transcript_428130completeRING-H2 finger protein ATL1 from Arabidopsis with 37.5% of identityE3 ubiquitin-protein ligase ATL41 from Arabidopsis with 65.79% of identityRING-like zinc finger (PF17123.4)-zinc ion binding(ENOG41121N2)-AT1G04360 (ath)-XP_019425307.1GO:0016021-
2384TRINITY_DN39208_c0_g1_i2Ll_transcript_428131completeRING-H2 finger protein ATL1 from Arabidopsis with 34.38% of identityE3 ubiquitin-protein ligase ATL41 from Arabidopsis with 65.79% of identityRING-like zinc finger (PF17123.4)-zinc ion binding(ENOG41121N2)-AT1G04360 (ath)-XP_019425307.1GO:0016021-
2385TRINITY_DN39209_c0_g1_i1Ll_transcript_428097internalE3 ubiquitin-protein ligase UPL2 from Arabidopsis with 37.04% of identityE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 41.86% of identityDomain of Unknown Function (DUF913) (PF06025.11)-ubiquitin protein ligase(COG5021)-AT1G70320 (ath)CNT0001834XP_019434286.1GO:0005829-
2386TRINITY_DN39211_c0_g1_i1Ll_transcript_428094complete--------XP_003589364.1--
2387TRINITY_DN39212_c0_g1_i1Ll_transcript_428046internal--------XP_015960672.1--
2388TRINITY_DN39213_c0_g1_i1Ll_transcript_4281043prime_partialDouble-stranded RNA-binding protein 4 from Oryza sativa with 39.82% of identityDouble-stranded RNA-binding protein 4 from Oryza sativa with 39.82% of identityDouble-stranded RNA binding motif (PF00035.25)-double-stranded RNA-binding protein 4-like(ENOG410YKXP)-4345448 (osa)-XP_020998813.1GO:0005634-
2389TRINITY_DN39213_c0_g1_i2Ll_transcript_4281053prime_partialDouble-stranded RNA-binding protein 4 from Oryza sativa with 39.82% of identityDouble-stranded RNA-binding protein 4 from Oryza sativa with 39.82% of identityDouble-stranded RNA binding motif (PF00035.25)-double-stranded RNA-binding protein 4-like(ENOG410YKXP)-4345448 (osa)-XP_020998813.1GO:0005634-
2390TRINITY_DN39213_c0_g1_i3Ll_transcript_4281063prime_partialDouble-stranded RNA-binding protein 4 from Oryza sativa with 39.82% of identityDouble-stranded RNA-binding protein 4 from Oryza sativa with 39.82% of identityDouble-stranded RNA binding motif (PF00035.25)-double-stranded RNA-binding protein 4-like(ENOG410YKXP)-4345448 (osa)-XP_020998813.1GO:0005634-
2391TRINITY_DN39217_c0_g1_i1Ll_transcript_4281025prime_partialProtein RALF-like 32 from Arabidopsis with 46.49% of identityProtein RALF-like 32 from Arabidopsis with 46.49% of identityRapid ALkalinization Factor (RALF) (PF05498.10)tRNA (RF00005)Rapid ALkalinization Factor (RALF)(ENOG41119R7)-AT4G14010 (ath)-XP_019442388.1GO:0048046-
2392TRINITY_DN39221_c0_g1_i1Ll_transcript_428056completeF-box protein CPR30 from Arabidopsis with 21.84% of identityF-box protein CPR30 from Arabidopsis with 21.84% of identityF-box domain (PF00646.32)-NA(ENOG4111BET)-AT4G12560 (ath)-XP_004509851.1GO:0005737GO:0005515
2393TRINITY_DN39223_c0_g1_i1Ll_transcript_428068internal-Dihydrolipoyl dehydrogenase, mitochondrial from Schizosaccharomyces with 63.21% of identity------XP_003550821.1--
2394TRINITY_DN39226_c0_g1_i1Ll_transcript_428044internalHeat shock 70 kDa protein cognate 4 from Manduca with 88.4% of identityHeat shock 70 kDa protein cognate 4 from Manduca with 88.4% of identityHsp70 protein (PF00012.19)-----XP_020977915.1GO:0005634GO:0000902
2395TRINITY_DN39229_c0_g1_i1Ll_transcript_428110complete--------XP_019453746.1--
2396TRINITY_DN39231_c0_g1_i1Ll_transcript_428109complete--------XP_019452073.1--
2397TRINITY_DN39237_c0_g1_i1Ll_transcript_4281403prime_partialSister chromatid cohesion protein DCC1 from Danio with 33.04% of identitySister chromatid cohesion protein DCC1 from Danio with 33.04% of identitySister chromatid cohesion protein Dcc1 (PF09724.8)-defective in sister chromatid cohesion 1 homolog (S. cerevisiae)(ENOG41108M8)-447872 (dre)-XP_019459359.1GO:0000785GO:0007064
2398TRINITY_DN39237_c0_g1_i2Ll_transcript_428141completeSister chromatid cohesion protein DCC1 from Danio with 32.88% of identitySister chromatid cohesion protein DCC1 from Danio with 32.88% of identitySister chromatid cohesion protein Dcc1 (PF09724.8)-defective in sister chromatid cohesion 1 homolog (S. cerevisiae)(ENOG41108M8)-447872 (dre)-XP_019459359.1GO:0000785GO:0007064
2399TRINITY_DN39241_c0_g1_i1Ll_transcript_4281253prime_partial--------XP_015944695.1--
2400TRINITY_DN39242_c0_g1_i1Ll_transcript_4280983prime_partial--------XP_020975908.1--