Protein Coding Transcripts

Showing 2,401-2,420 of 267,349 items.
#ID TranscriptLuluDB transcriptORF TypeBlastp annotationsBlastx annotationsPfam annotationsRfam annotationsEggnog annotationsMirBase annotationsKegg accesionsCantataDB accesionsNCBI protein accesionsBlast GO accesionsPfam GO accesions 
  
2401TRINITY_DN39246_c0_g1_i1Ll_transcript_428073internal--PB1 domain (PF00564.23)-----XP_019425293.1-GO:0005515
2402TRINITY_DN39247_c0_g1_i1Ll_transcript_428152internalHeat shock protein hsp98 from Neurospora with 79.9% of identityHeat shock protein hsp98 from Neurospora with 79.9% of identityClp amino terminal domain, pathogenicity island component (PF02861.19)---NCU00104 (ncr)-XP_006582012.1GO:0005829GO:0019538
2403TRINITY_DN39254_c0_g1_i1Ll_transcript_428101internalElongation factor 2 from Sophophora with 88.24% of identityElongation factor 2 from Sophophora with 88.24% of identityElongation factor G, domain IV (PF03764.17)-Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)(COG0480)-Dmel_CG2238 (dme)-XP_013467256.1GO:0005829GO:0005525
2404TRINITY_DN39261_c0_g1_i1Ll_transcript_4280905prime_partial--Plant invertase/pectin methylesterase inhibitor (PF04043.14)-----XP_019435026.1-GO:0004857
2405TRINITY_DN39262_c0_g1_i1Ll_transcript_4280583prime_partial--------XP_019445543.1--
2406TRINITY_DN39262_c0_g1_i2Ll_transcript_428059complete--------XP_019445543.1--
2407TRINITY_DN39262_c0_g1_i3Ll_transcript_428060complete--------XP_019445543.1--
2408TRINITY_DN39269_c0_g2_i1Ll_transcript_428163complete-Lipase 3 from Sophophora with 39.33% of identity------XP_020209765.1--
2409TRINITY_DN39269_c0_g2_i2Ll_transcript_4281643prime_partial-Lipase 3 from Sophophora with 38.79% of identity--Alpha beta hydrolase(COG0596)-Dmel_CG8823 (dme)-XP_020209765.1GO:0016788-
2410TRINITY_DN39272_c0_g1_i1Ll_transcript_428039complete--------XP_019418409.1--
2411TRINITY_DN39272_c0_g1_i3Ll_transcript_428041complete--------XP_019418409.1--
2412TRINITY_DN39275_c0_g1_i1Ll_transcript_428158completeRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 40.4% of identityRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 43.61% of identityReverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)-----XP_012574204.1GO:0004190-
2413TRINITY_DN39281_c0_g1_i1Ll_transcript_428147internalMechanosensitive ion channel protein 8 from Arabidopsis with 64.84% of identityMechanosensitive ion channel protein 8 from Arabidopsis with 68.84% of identity----AT2G17010 (ath)-XP_019438255.1GO:0012505-
2414TRINITY_DN39281_c0_g2_i1Ll_transcript_4281483prime_partial--------XP_019438255.1--
2415TRINITY_DN39282_c0_g1_i1Ll_transcript_4280893prime_partialProtein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 31.3% of identityProtein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 31.3% of identity--Plant protein of unknown function (DUF641)(ENOG410YCXF)-AT5G58960 (ath)-XP_019439086.1GO:0009959-
2416TRINITY_DN39285_c0_g1_i1Ll_transcript_428115internalBTB/POZ domain-containing protein At5g03250 from Arabidopsis with 57.58% of identityBTB/POZ domain-containing protein At5g03250 from Arabidopsis with 57.58% of identityNPH3 family (PF03000.13)-BTB POZ domain-containing protein(ENOG410YCM9)-AT5G03250 (ath)-XP_019434035.1GO:0016567-
2417TRINITY_DN39285_c0_g2_i1Ll_transcript_428116internalBTB/POZ domain-containing protein At5g03250 from Arabidopsis with 58.51% of identityBTB/POZ domain-containing protein At5g03250 from Arabidopsis with 58.51% of identityNPH3 family (PF03000.13)-BTB POZ domain-containing protein(ENOG410YCM9)-AT5G03250 (ath)-XP_019434035.1GO:0016567-
2418TRINITY_DN39287_c0_g1_i1Ll_transcript_4280485prime_partial--NB-ARC domain (PF00931.21)-----XP_019431981.1-GO:0043531
2419TRINITY_DN39287_c0_g2_i1Ll_transcript_428049internal--------XP_019431981.1--
2420TRINITY_DN39287_c0_g4_i1Ll_transcript_4280513prime_partial--------XP_019431981.1--