Protein Coding Transcripts

Showing 261-280 of 267,349 items.
#ID TranscriptLuluDB transcriptORF TypeBlastp annotationsBlastx annotationsPfam annotationsRfam annotationsEggnog annotationsMirBase annotationsKegg accesionsCantataDB accesionsNCBI protein accesionsBlast GO accesionsPfam GO accesions 
  
261TRINITY_DN16097_c0_g1_i1Ll_transcript_496145internalMediator of RNA polymerase II transcription subunit 33B from Arabidopsis with 62.07% of identityMediator of RNA polymerase II transcription subunit 33B from Arabidopsis with 62.07% of identity--Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)-AT2G48110 (ath)-XP_019426144.1GO:0016592-
262TRINITY_DN16097_c0_g2_i1Ll_transcript_496146internalMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 52.74% of identityMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 52.24% of identity--Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)-AT3G23590 (ath)-XP_019426144.1GO:0016592-
263TRINITY_DN16104_c0_g1_i1Ll_transcript_477635completeTranscription repressor OFP14 from Arabidopsis with 36.67% of identityTranscription repressor OFP14 from Arabidopsis with 36.33% of identityTranscriptional repressor, ovate (PF04844.12)-Pfam:DUF623(ENOG410YP0A)-AT1G79960 (ath)-XP_019436429.1GO:0005634-
264TRINITY_DN16117_c0_g1_i1Ll_transcript_4776265prime_partialCBL-interacting serine/threonine-protein kinase 14 from Arabidopsis with 39.34% of identityCBL-interacting serine/threonine-protein kinase 14 from Arabidopsis with 36.29% of identityNAF domain (PF03822.13)-Serine Threonine protein kinase(COG0515)-AT5G01820 (ath)-XP_019462821.1GO:0005634GO:0007165
265TRINITY_DN16165_c0_g1_i1Ll_transcript_4776275prime_partial--------XP_019418405.1--
266TRINITY_DN16193_c0_g2_i1Ll_transcript_4776225prime_partial--------XP_019424986.1--
267TRINITY_DN16213_c0_g1_i2Ll_transcript_3671265prime_partialExpansin-like B1 from Arabidopsis with 58.02% of identityExpansin-like B1 from Arabidopsis with 58.02% of identityPollen allergen (PF01357.20)-expansin-like(ENOG41115SZ)-AT4G17030 (ath)-XP_019423941.1GO:0005576-
268TRINITY_DN16221_c0_g1_i1Ll_transcript_367124completeProbable cysteine protease RD19D from Arabidopsis with 72.32% of identityProbable cysteine protease RD19D from Arabidopsis with 72.54% of identityCathepsin propeptide inhibitor domain (I29) (PF08246.11)-cathepsin(COG4870)-AT3G54940 (ath)CNT0002196XP_019459601.1GO:0005615GO:0008234
269TRINITY_DN16232_c0_g1_i1Ll_transcript_367112complete--Protein of unknown function (DUF1365) (PF07103.10)-----XP_019420152.1--
270TRINITY_DN16264_c0_g1_i1Ll_transcript_3671275prime_partial--Zinc knuckle (PF14392.5)-----XP_019431020.1--
271TRINITY_DN16271_c0_g1_i1Ll_transcript_367145internalRibosome-interacting GTPase 1 from Saccharomyces with 77.55% of identityUncharacterized GTP-binding protein C9.07c from Schizosaccharomyces with 77.08% of identityChlamydia polymorphic membrane protein (Chlamydia_PMP) repeat (PF02415.16)---YAL036C (sce)-XP_003602486.1GO:0010494GO:0005525
272TRINITY_DN16273_c0_g1_i1Ll_transcript_367138internal--gag-polypeptide of LTR copia-type (PF14223.5)-----XP_014491092.1--
273TRINITY_DN16296_c0_g1_i1Ll_transcript_3671115prime_partial-----------
274TRINITY_DN16307_c0_g1_i1Ll_transcript_503883internalUncharacterized protein At4g22758 from Arabidopsis with 38.24% of identityUncharacterized protein At4g22758 from Arabidopsis with 38.24% of identity--Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)-AT4G22758 (ath)-XP_019436762.1--
275TRINITY_DN16319_c0_g2_i1Ll_transcript_503878internal--------XP_019448545.1--
276TRINITY_DN16374_c0_g1_i1Ll_transcript_503898internalProtein NRT1/ PTR FAMILY 8.1 from Arabidopsis with 67.59% of identityProtein NRT1/ PTR FAMILY 8.1 from Arabidopsis with 67.59% of identityPOT family (PF00854.20)-transporter(COG3104)-AT3G54140 (ath)-XP_017416034.1GO:0016021GO:0005215
277TRINITY_DN16380_c1_g1_i1Ll_transcript_503880internal--------XP_016172464.1--
278TRINITY_DN16449_c0_g2_i1Ll_transcript_401248internalSerine--tRNA ligase, cytoplasmic from Schizosaccharomyces with 50% of identitySerine--tRNA ligase, cytoplasmic from Schizosaccharomyces with 50% of identity----SPAC29A4.15 (spo)-XP_016162033.1GO:0005737-
279TRINITY_DN16456_c0_g2_i1Ll_transcript_4012673prime_partial--------XP_004516485.1--
280TRINITY_DN16474_c0_g1_i1Ll_transcript_401270complete-40S ribosomal protein S22-B from Candida with 80.2% of identity------XP_013457334.1--