| Id Trinity | TRINITY_DN12192_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_523226 |
| Sequence | CTTCTTTATAAGCTCTTCCCAACAATAACCTAAGTGCTGAAATGACAAGATAAACCCAAATAAGATCTCTATAAGCTCTTCCAAACTTCTGCATAGTCCC TCATAATAGCTTATGACAGTTACAATTCTGATTACTAAATTGTTTTAGTAGCTCCTAGGCTTAGCTTTTCACTACTTTCGTGGTTCTAGACCTCTATATA AAACAGTTGAGATCAGTTTCAGGTCTCAGATTTAATTATTGACAGCTCAAATCTTTCTTCCTTCTTATCATGCTCCTTCACTTTCTTGCTCCTTCTTATA GATTATGTACTCTATTATGTGTCAACACAACCTGCAAGCAAGTGTTGCGTGTTGTCTTTCTGGGCTTTGATGTTTTCTTTGTGATCTTGTGTGTTCTTTT GGTATGCCTGATTGGCATTGCCGTCTGTTGTTCTATGCCATGCGTTGTTGCTTTTCTCTATACTCTTGCAGTACAGGAAGGTGCGTCAGATGCAGATCAT ATTATACTTCCAAGATACAAATTTCGAATATTAAGCAATGACGAAAAGGCTACCGGGGGAGCTGGAACAATGTTTCCCATAAAAAATGGCAGTGGTTACT TAGCAAAAGAAAGAATACTTTTACCAGAGGATACGGAATGCTGCATATGCCTCTGTTCATATGAGAATGGAGAAGAGCTTCATGCTCTTCCTTGCAATCA TCATTTCCATTCTACATGCATATTAAAATGGCTAAAGATGAATGCAATTTGTCCTCTTTGCAAGTACAATGTTCTCAAGGGAAATAAACAGTTGTAATAA TGGAAAAGTAAAGACCATTGGAGAGCTATTATGTATTTGAATGAGTCTGGGGTGTTTGTTGACTGTTATTTTTACTTTTTTAAACTGAAGGAAAAATATA TTTAGTAAATGGAGGAGCTTTATGTAATAAATGGGTGGCAAAATTAAGGAAAAATATATTTAGTAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_119693; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_523226
| Blastp | E3 ubiquitin protein ligase RIE1 from Arabidopsis with 59.73% of identity |
|---|---|
| Blastx | E3 ubiquitin protein ligase RIE1 from Arabidopsis with 59.73% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT2G01735) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420358.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |