Id Trinity | TRINITY_DN15231_c0_g1_i1 |
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Name Transcript | Ll_transcript_318281 |
Sequence | CGGCCATTCTGGCAGACAAGCTACTTTGCAAAGAATCAAAACTCTAGTGCATTGGAAGGGTATGAGTAAAGATGTGCATTCATTCATCACACATTGTGAG GTATGCCAAAAATGTAAGTATGAGACAACTTCTTATCCTGGACTCCTACAACCTCTGCCTATTCCAGGCCTGGTTTGGCAACACATATCCATGGATTTCA TTGAAGGATTACCTACTTCTTTTGGTAAGCAAGTCATCTTTGTGATAGTGGATAGACTGAGCAAGGCAGCCCATTTCATCTCTATGTCTCATCCTTATAG AGCTGCCAGTGTAGCTCAGACTTTCTTAGATCATGTATTCAAGTTACATGGATTTCCTGAATCCATCACAAGTGATAGAGATCCAATTTTTATAAGCAAT TTTTGGCAAGAATTGATGGCTTATCAGGGAGTACAACTCAACCTCTCCACTGCTTATCATCCACAATCAGCTGGCCAAACTGAAGTGGTGAATAGATGTT TGGAGACTTATCTCAGGTGCATGTGTGCAGATAAACCTCAGCAATGGTCCAAGTGGATTCCTTTGGCTGAATGGTGGTACAACACCACCTATCACACTTC TATTAAAGCTAC BLAST |
Tissue | pods |
Gene name | LI_gene_120706; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_318281
Blastp | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 38.58% of identity |
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Blastx | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 38.58% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YIL082W-A) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414654.1) |
Pfam | Integrase core domain (PF00665.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |